Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU835949 |
| length | 633 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 1 |
| gene id | shhb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 65483660 ~ 65486476 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU835944 | lncRNA | downstream | 8389 | 65474989 ~ 65475294 (-) | True | G736190 |
| TU835942 | lncRNA | downstream | 10718 | 65472493 ~ 65472965 (-) | True | G736188 |
| TU835881 | lncRNA | downstream | 97149 | 65383228 ~ 65386534 (-) | True | G736134 |
| TU835791 | lncRNA | downstream | 232494 | 65250850 ~ 65251189 (-) | True | G736049 |
| TU835701 | lncRNA | downstream | 357521 | 65122982 ~ 65126162 (-) | True | G735971 |
| TU836045 | lncRNA | upstream | 124831 | 65609146 ~ 65611345 (-) | True | LOC110530362 |
| TU836069 | lncRNA | upstream | 159040 | 65643355 ~ 65644138 (-) | True | G736296 |
| TU836071 | lncRNA | upstream | 162769 | 65647084 ~ 65647297 (-) | True | G736298 |
| TU836086 | lncRNA | upstream | 183972 | 65668287 ~ 65670335 (-) | False | G736312 |
| TU836088 | lncRNA | upstream | 183972 | 65668287 ~ 65670379 (-) | True | G736312 |
| XM_021613341.2 | mRNA | downstream | 36333 | 65425967 ~ 65447350 (-) | True | cnpy1 |
| XM_021613340.2 | mRNA | downstream | 36337 | 65425967 ~ 65447346 (-) | False | cnpy1 |
| XM_021613342.2 | mRNA | downstream | 36337 | 65425967 ~ 65447346 (-) | False | cnpy1 |
| XM_036985989.1 | mRNA | downstream | 75070 | 65389548 ~ 65408613 (-) | True | paxip1 |
| XM_036985986.1 | mRNA | downstream | 75076 | 65389548 ~ 65408607 (-) | False | paxip1 |
| XM_036985990.1 | mRNA | upstream | 35935 | 65520250 ~ 65546632 (-) | True | LOC110530358 |
| XM_021613349.2 | mRNA | upstream | 124463 | 65608778 ~ 65637987 (-) | False | LOC110530362 |
| XR_002474514.2 | mRNA | upstream | 124465 | 65608780 ~ 65637987 (-) | False | LOC110530362 |
| XM_021611268.2 | mRNA | upstream | 207171 | 65691486 ~ 65692775 (-) | False | LOC110529129 |
| XM_021613363.2 | mRNA | upstream | 253946 | 65738261 ~ 65850047 (-) | False | LOC110530368 |
| TU835604 | other | downstream | 443442 | 64990301 ~ 65040241 (-) | True | G735880 |
| TU831229 | other | downstream | 3298503 | 62180687 ~ 62185180 (-) | True | LOC110530961 |
| TU831141 | other | downstream | 3435564 | 62045035 ~ 62048119 (-) | False | G731764 |
| TU825771 | other | downstream | 7619806 | 57862738 ~ 57863877 (-) | True | LOC110530228 |
| TU825774 | other | downstream | 7636994 | 57820047 ~ 57846689 (-) | True | G726900 |
| TU835971 | other | upstream | 33852 | 65518167 ~ 65528583 (-) | True | G736216 |
| TU836724 | other | upstream | 616781 | 66101096 ~ 66101627 (-) | True | G736841 |
| TU836773 | other | upstream | 709339 | 66193654 ~ 66209991 (-) | False | LOC110530385 |
| TU837419 | other | upstream | 1074881 | 66559196 ~ 66560517 (-) | True | G737449 |
| TU837387 | other | upstream | 1229378 | 66713693 ~ 66714496 (-) | True | G737422 |
