Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003577 |
| length | 1320 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 2 |
| gene id | XLOC_001778 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 406146 ~ 417188 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0090090 | negative regulation of canonical Wnt signaling pathway | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-091204-226 | Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be active in cytoplasm. Is expressed in several structures, including cranial neural crest cell; immature eye; mesoderm; nervous system; and pectoral fin bud. Orthologous to human DACT3 (dishevelled binding antagonist of beta catenin 3). |
| ensembl_id | ENSDART00000124319 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005661 | lncRNA | upstream | 14743 | 398344 ~ 398759 (+) | True | XLOC_001776 |
| TCONS_00005790 | lncRNA | upstream | 129571 | 282324 ~ 283931 (+) | True | XLOC_001773 |
| TCONS_00005789 | lncRNA | upstream | 219620 | 187819 ~ 193882 (+) | False | XLOC_001769 |
| TCONS_00003568 | lncRNA | upstream | 219620 | 190543 ~ 193882 (+) | True | XLOC_001769 |
| TCONS_00003567 | lncRNA | upstream | 223019 | 187819 ~ 190483 (+) | False | XLOC_001769 |
| TCONS_00005791 | lncRNA | downstream | 2045 | 419233 ~ 420892 (+) | True | XLOC_001779 |
| TCONS_00005662 | lncRNA | downstream | 123105 | 540293 ~ 541332 (+) | False | XLOC_001786 |
| TCONS_00005792 | lncRNA | downstream | 123244 | 540432 ~ 543582 (+) | False | XLOC_001786 |
| TCONS_00005795 | lncRNA | downstream | 123721 | 540909 ~ 543063 (+) | False | XLOC_001786 |
| TCONS_00005794 | lncRNA | downstream | 123721 | 540909 ~ 543063 (+) | False | XLOC_001786 |
| TCONS_00003575 | mRNA | upstream | 13289 | 399363 ~ 400213 (+) | True | XLOC_001777 |
| TCONS_00003574 | mRNA | upstream | 30886 | 375042 ~ 382616 (+) | True | XLOC_001775 |
| TCONS_00003573 | mRNA | upstream | 63746 | 334627 ~ 349756 (+) | True | XLOC_001774 |
| TCONS_00003572 | mRNA | upstream | 156459 | 252425 ~ 257043 (+) | True | XLOC_001772 |
| TCONS_00003571 | mRNA | upstream | 189617 | 213937 ~ 223885 (+) | True | XLOC_001771 |
| TCONS_00003578 | mRNA | downstream | 11081 | 428269 ~ 432188 (+) | True | XLOC_001780 |
| TCONS_00003579 | mRNA | downstream | 22504 | 439692 ~ 449159 (+) | True | XLOC_001781 |
| TCONS_00003580 | mRNA | downstream | 36431 | 453619 ~ 454622 (+) | True | XLOC_001782 |
| TCONS_00003581 | mRNA | downstream | 49738 | 466926 ~ 505370 (+) | True | XLOC_001783 |
| TCONS_00003582 | mRNA | downstream | 89350 | 506538 ~ 512306 (+) | False | XLOC_001784 |
| TCONS_00003569 | other | upstream | 201555 | 211782 ~ 211947 (+) | True | XLOC_001770 |
| TCONS_00003583 | other | downstream | 89375 | 506563 ~ 507256 (+) | True | XLOC_001784 |
| TCONS_00003590 | other | downstream | 388056 | 805244 ~ 805359 (+) | True | XLOC_001790 |
| TCONS_00003597 | other | downstream | 1247734 | 1664922 ~ 1665038 (+) | True | XLOC_001797 |
| TCONS_00003605 | other | downstream | 1758395 | 2175583 ~ 2267357 (+) | False | XLOC_001805 |
| TCONS_00003616 | other | downstream | 2271377 | 2688565 ~ 2688681 (+) | True | XLOC_001815 |
