RNA id: TU792305


Basic Information

Item Value
RNA id TU792305
length 308
RNA type TUCP
GC content 0.44
exon number 1
gene id G696068
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 30846902 ~ 30847209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gatgtgtaagggctatttgaccaagaaggagagtgatggagtgctgcatcagatgacctggtctccacaatcacctgacctcaacccatttgagatggtttgggatgaattggacctcagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaactccttcaagactgttggaaagcattccaggtgaagctggttgagagaatgctcagcgtgtgcaaagctgtcatcaaagcaatgcgtggctacttgaagaatctcaaatatcaaatgtattttgatttgtttaacactttttttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU792298 lncRNA downstream 8257 30838409 ~ 30838645 (-) True G696061
TU792295 lncRNA downstream 18652 30828040 ~ 30828250 (-) True G696058
TU792293 lncRNA downstream 18919 30826637 ~ 30827983 (-) True G696056
TU792292 lncRNA downstream 19097 30826637 ~ 30827805 (-) False G696056
TU792285 lncRNA downstream 36934 30809513 ~ 30809968 (-) True G696049
TU792306 lncRNA upstream 176 30847385 ~ 30848171 (-) True G696069
TU792348 lncRNA upstream 50283 30897492 ~ 30898394 (-) True G696101
TU792352 lncRNA upstream 57389 30904598 ~ 30905612 (-) True G696105
TU792355 lncRNA upstream 58558 30905767 ~ 30907643 (-) True G696108
TU792360 lncRNA upstream 70851 30918060 ~ 30919501 (-) True G696113
XR_005052854.1 mRNA downstream 77557 30767251 ~ 30769345 (-) True LOC118965507
XM_036985273.1 mRNA downstream 159424 30529289 ~ 30687478 (-) True LOC110529771
XM_036985256.1 mRNA downstream 427290 30292451 ~ 30419612 (-) False LOC110529226
XM_036985257.1 mRNA downstream 427290 30292451 ~ 30419612 (-) False LOC110529226
XM_036985258.1 mRNA downstream 427290 30292451 ~ 30419612 (-) False LOC110529226
XM_021612293.2 mRNA upstream 64922 30912131 ~ 30989709 (-) True LOC110529773
XM_021612294.2 mRNA upstream 177167 31024376 ~ 31044032 (-) False LOC110529774
XM_036985274.1 mRNA upstream 177171 31024380 ~ 31044029 (-) False LOC110529774
XM_021612295.2 mRNA upstream 177172 31024381 ~ 31043996 (-) True LOC110529774
XM_021612296.2 mRNA upstream 200301 31047510 ~ 31051722 (-) True LOC110529775
TU790962 other downstream 784734 30001763 ~ 30062168 (-) False G694858
TU790963 other downstream 784734 30038588 ~ 30062168 (-) True G694858
TU789639 other downstream 1888070 28958395 ~ 28958832 (-) True G693665
TU789291 other downstream 2252471 28593341 ~ 28594431 (-) True G693383
TU789000 other downstream 2365004 28478817 ~ 28481898 (-) True si:dkey-85n7.8
TU792310 other upstream 7898 30855107 ~ 30855407 (-) True G696073
TU792778 other upstream 630145 31477354 ~ 31478027 (-) True G696499
TU792983 other upstream 810517 31657726 ~ 31679735 (-) True LOC110529793
TU793919 other upstream 1367277 32214486 ~ 32217549 (-) False LOC110529804
TU793920 other upstream 1367277 32214486 ~ 32217549 (-) True LOC110529804

Expression Profile