RNA id: TU792932



Basic Information


Item Value
RNA id TU792932
length 314
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G696649
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31642607 ~ 31642920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggttagggcagtgtgcagtgtggttgagattgcatcgtctgtggacctatttgggcggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggggatatggtccttgactagtctctcaaagcacttcatgatgacggaagtgagtgctacggggcggtagtcgtttagctcagttacctcagctttcttgggaacaggaacaatggtggcactcttgaagcatgtgggaacagcagactggtatagggattgattgaatatgtccgtaaacacaccggccagctggtctgcgcatgctctgaggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU792923 lncRNA downstream 4235 31638140 ~ 31638372 (-) True G696640
TU792922 lncRNA downstream 6988 31635324 ~ 31635619 (-) True G696639
TU792825 lncRNA downstream 68088 31572269 ~ 31574519 (-) True G696543
TU792811 lncRNA downstream 91327 31550512 ~ 31551280 (-) True G696531
TU792645 lncRNA downstream 240051 31397740 ~ 31402556 (-) True G696378
TU792942 lncRNA upstream 11480 31654400 ~ 31654607 (-) True G696659
TU792945 lncRNA upstream 13079 31655999 ~ 31656452 (-) True G696662
TU793007 lncRNA upstream 54095 31697015 ~ 31697216 (-) True G696724
TU793205 lncRNA upstream 200803 31843723 ~ 31843932 (-) True G696920
TU793217 lncRNA upstream 208626 31851546 ~ 31851856 (-) True G696932
XM_021612325.2 mRNA downstream 36416 31602683 ~ 31606191 (-) True LOC110529792
XM_021612323.2 mRNA downstream 138617 31486817 ~ 31503990 (-) True LOC110529791
XM_021612322.2 mRNA downstream 184360 31453334 ~ 31458247 (-) True LOC110529790
LOC110529789 mRNA downstream 207237 31432392 ~ 31435370 (-) True LOC110529789
XM_021612321.2 mRNA downstream 210880 31428524 ~ 31431727 (-) True LOC110529787
XM_021612326.2 mRNA upstream 14712 31657632 ~ 31679802 (-) False LOC110529793
XM_021612327.2 mRNA upstream 14712 31657632 ~ 31703525 (-) False LOC110529793
XM_021612332.2 mRNA upstream 489763 32132683 ~ 32135194 (-) True LOC110529796
XM_021612343.2 mRNA upstream 571531 32214451 ~ 32217570 (-) False LOC110529804
XM_021612342.2 mRNA upstream 571531 32214451 ~ 32217572 (-) False LOC110529804
TU792778 other downstream 164580 31477354 ~ 31478027 (-) True G696499
TU792310 other downstream 787200 30855107 ~ 30855407 (-) True G696073
TU792305 other downstream 795398 30846902 ~ 30847209 (-) True G696068
TU790962 other downstream 1580439 30001763 ~ 30062168 (-) False G694858
TU792983 other upstream 14806 31657726 ~ 31679735 (-) True LOC110529793
TU793919 other upstream 571566 32214486 ~ 32217549 (-) False LOC110529804
TU793920 other upstream 571566 32214486 ~ 32217549 (-) True LOC110529804
TU794118 other upstream 855879 32498799 ~ 32499410 (-) True G697774
TU794745 other upstream 1346325 32989245 ~ 32990061 (-) True G698356

Expression Profile