RNA id: TU795765



Basic Information


Item Value
RNA id TU795765
length 210
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G699323
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 33647436 ~ 33647645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


catctgtaaaagtttgtgagtgtttttggtgacaagccaaatttcttcagcttcctgaggttgaagaggcgctgctgcgccttcttcaccacgctgtctgtgtgggtggaccatttcagtttgtccgtgatgtgtacgccgaggaacttgaactttccaccctctccactactgttctgttgatgtggatagggggctgctccctctgct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU795747 lncRNA downstream 20867 33626239 ~ 33626569 (-) True G699311
TU795744 lncRNA downstream 25323 33621678 ~ 33622113 (-) True G699309
TU795509 lncRNA downstream 60763 33586419 ~ 33586673 (-) True G699093
TU795397 lncRNA downstream 223421 33421436 ~ 33424015 (-) True G698986
TU795399 lncRNA downstream 236005 33409813 ~ 33411431 (-) False LOC110529824
TU795766 lncRNA upstream 63 33647708 ~ 33647983 (-) True G699324
TU795768 lncRNA upstream 1958 33649603 ~ 33649829 (-) True G699326
TU795760 lncRNA upstream 33096 33680741 ~ 33683970 (-) True G699319
TU795827 lncRNA upstream 110129 33757774 ~ 33788417 (-) True G699381
TU795875 lncRNA upstream 176428 33824073 ~ 33824422 (-) True G699427
XM_021612387.2 mRNA downstream 98128 33484801 ~ 33549308 (-) True LOC110529828
XM_021612386.2 mRNA downstream 188964 33454287 ~ 33458472 (-) True LOC110529827
XM_021612383.2 mRNA downstream 211559 33426517 ~ 33435877 (-) True ints9
XR_005052862.1 mRNA downstream 234427 33409803 ~ 33413009 (-) False LOC110529824
XM_021612410.2 mRNA upstream 37724 33685369 ~ 33689052 (-) True LOC110529832
XM_036985352.1 mRNA upstream 71729 33719374 ~ 33822238 (-) False cdc42bpab
XM_036985353.1 mRNA upstream 71729 33719374 ~ 33822238 (-) False cdc42bpab
XM_036985354.1 mRNA upstream 71729 33719374 ~ 33822238 (-) False cdc42bpab
XM_036985355.1 mRNA upstream 71729 33719374 ~ 33822238 (-) False cdc42bpab
TU794745 other downstream 657375 32989245 ~ 32990061 (-) True G698356
TU794118 other downstream 1148026 32498799 ~ 32499410 (-) True G697774
TU793919 other downstream 1429887 32214486 ~ 32217549 (-) False LOC110529804
TU793920 other downstream 1429887 32214486 ~ 32217549 (-) True LOC110529804
TU792983 other downstream 1967701 31657726 ~ 31679735 (-) True LOC110529793
TU795919 other upstream 295377 33943022 ~ 33952356 (-) True G699468
TU795985 other upstream 375646 34023291 ~ 34023885 (-) True ankef1a
TU798118 other upstream 1935353 35582998 ~ 35589877 (-) True G701454
TU798044 other upstream 1993710 35641355 ~ 35687636 (-) False LOC110529865
TU798045 other upstream 1993710 35641355 ~ 35687465 (-) False LOC110529865

Expression Profile