RNA id: TU823687



Basic Information


Item Value
RNA id TU823687
length 258
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G725062
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56328662 ~ 56328919 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCTTACTTGTGTGTTCCGTGGCAGGTTTGATGGGTGTTCGGTTCAGCTTGTCCAATACTCTTTCAGTGTGTGTCTCAATTTTCAAACATTTTATCATGCTTTCTCCTATCTAACAAAAGGCGGAATCAACAAATGCCTAtacaacattacattttttttagggGGGGAGCAGAAAAGAGGAAACTAATCAGTCCAGTATCTCTCCAAAAACACCTGCCTTGCCTGGTTTTCTACTTGTCAAACCAATCCCAGCGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU823662 lncRNA downstream 55666 56272294 ~ 56272996 (-) True G725038
TU823610 lncRNA downstream 76223 56249107 ~ 56252439 (-) False G725000
TU823690 lncRNA upstream 1393 56330312 ~ 56330584 (-) True G725065
TU823693 lncRNA upstream 8807 56337726 ~ 56366731 (-) True G725068
TU823727 lncRNA upstream 40120 56369039 ~ 56369248 (-) True G725090
TU823715 lncRNA upstream 45734 56374653 ~ 56380866 (-) False LOC110530186
TU823737 lncRNA upstream 73208 56402127 ~ 56402459 (-) True G725100
XM_021613049.2 mRNA downstream 34285 56275091 ~ 56294377 (-) True LOC110530183
XM_021613047.2 mRNA downstream 432320 55872953 ~ 55896342 (-) False LOC110530179
XM_021613046.2 mRNA downstream 489321 55815384 ~ 55839341 (-) True LOC110530178
XM_036985739.1 mRNA downstream 513734 55799908 ~ 55814928 (-) False LOC110530176
XM_021613042.2 mRNA downstream 514314 55801428 ~ 55814348 (-) True LOC110530176
XM_021613052.2 mRNA upstream 45669 56374588 ~ 56386152 (-) False LOC110530186
XM_021613051.2 mRNA upstream 45669 56374588 ~ 56386539 (-) False LOC110530186
XM_021613053.2 mRNA upstream 45669 56374588 ~ 56386555 (-) False LOC110530186
XM_021613061.2 mRNA upstream 141222 56470141 ~ 56486902 (-) False LOC110530191
XM_021613062.2 mRNA upstream 141222 56470141 ~ 56486903 (-) False LOC110530191
TU823623 other downstream 95723 56219516 ~ 56232939 (-) True G725007
TU823541 other downstream 200374 56120203 ~ 56128288 (-) False G724943
TU822909 other downstream 537177 55785517 ~ 55791485 (-) True G724400
TU822777 other downstream 682648 55635538 ~ 55646014 (-) True G724287
TU822429 other downstream 931777 55396624 ~ 55396885 (-) True G723966
TU823714 other upstream 45734 56374653 ~ 56386516 (-) False LOC110530186
TU823713 other upstream 54210 56383129 ~ 56386516 (-) True LOC110530186
TU823957 other upstream 259424 56588343 ~ 56589271 (-) True G725280
TU825127 other upstream 500722 56829641 ~ 56840126 (-) True penka
TU825323 other upstream 807222 57136141 ~ 57137113 (-) True G726496

Expression Profile