RNA id: TU830698



Basic Information


Item Value
RNA id TU830698
length 300
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G731375
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61325226 ~ 61325525 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAatttacatctctctctgtttgccaTTTGCACAGTAGATTAAGTTAATACAAGAATAGCATGGAACATGTCCTGGCAAACAACATGACAAATCAGAACACATTCAAACACTGTTCATGTTGTTAGTGAGTAGTAATCTCTCGTCTAGTGGACAAATTCCTGTTGCCAGTGAAATGGCAAGAATCCGTCaagaaaaaaactattttcacaTAACTTCAATACTGACAAAGTTACTTTatcgtggcaggttaggagaattaggttaaggttaggaaaatagTTAAcatgctgacccccccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830690 lncRNA downstream 15141 61309575 ~ 61310085 (-) True G731367
TU830688 lncRNA downstream 18677 61306320 ~ 61306549 (-) True G731365
TU830667 lncRNA downstream 28042 61295363 ~ 61297184 (-) True G731344
TU830683 lncRNA downstream 36673 61288312 ~ 61288553 (-) True G731360
TU830611 lncRNA downstream 151965 61173034 ~ 61173261 (-) True G731295
TU830704 lncRNA upstream 17269 61342794 ~ 61343177 (-) True G731381
TU830705 lncRNA upstream 18589 61344114 ~ 61358907 (-) True G731382
TU830707 lncRNA upstream 19085 61344610 ~ 61380805 (-) True G731383
TU830736 lncRNA upstream 61028 61386553 ~ 61436469 (-) True G731412
TU830765 lncRNA upstream 99785 61425310 ~ 61478476 (-) True G731439
XM_021611264.2 mRNA downstream 85455 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 91796 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 124229 61189832 ~ 61200997 (-) True adhfe1
XM_021613195.2 mRNA downstream 135577 61184985 ~ 61189649 (-) False si:dkey-97a13.12
XM_021613211.2 mRNA upstream 14477 61340002 ~ 61341211 (-) True LOC110530281
XM_036985921.1 mRNA upstream 678647 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 678647 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 678647 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 678647 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3461349 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3478537 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3513804 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4019700 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4188113 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 719510 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 855162 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3664776 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4192642 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4775571 66101096 ~ 66101627 (-) True G736841

Expression Profile