RNA id: TU830704



Basic Information


Item Value
RNA id TU830704
length 384
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G731381
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61342794 ~ 61343177 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGCAGAGTCAGACAACGGGAACCTCTGGATCATCAAGGGGACTGATTTTAATACTGATTTAGATGTAATTAAATTGAGATGGGCATCGAATCTCCCCAGGAATTCAATGGCACTAACTGATCCAAAAGTCACCTGCCTCAGCATATACTTTGGGAAGTCATTAGCTCCCTGCTTGTACCACAACAGTTATGGATTTGTATCCGTAGTATCACATTGACAGCCCAGTGTGACCTGTTAAGGTTAGTGGTCACATCTCCTGGTGGCTGAATGACTGAGTCTTCTTCTCTGCATTCTGGAAAATAATGTAATACACATTAGTATTAGGAGTGAATAAAAAAGTATGAAATTAATAGTAGAACTATTGtactaaaaaatatatgtttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830698 lncRNA downstream 17269 61325226 ~ 61325525 (-) True G731375
TU830690 lncRNA downstream 32709 61309575 ~ 61310085 (-) True G731367
TU830688 lncRNA downstream 36245 61306320 ~ 61306549 (-) True G731365
TU830667 lncRNA downstream 45610 61295363 ~ 61297184 (-) True G731344
TU830683 lncRNA downstream 54241 61288312 ~ 61288553 (-) True G731360
TU830705 lncRNA upstream 937 61344114 ~ 61358907 (-) True G731382
TU830707 lncRNA upstream 1433 61344610 ~ 61380805 (-) True G731383
TU830736 lncRNA upstream 43376 61386553 ~ 61436469 (-) True G731412
TU830765 lncRNA upstream 82133 61425310 ~ 61478476 (-) True G731439
TU830766 lncRNA upstream 83806 61426983 ~ 61427303 (-) True G731440
XM_021613211.2 mRNA downstream 1583 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 103023 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 109364 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 141797 61189832 ~ 61200997 (-) True adhfe1
XM_021613195.2 mRNA downstream 153145 61184985 ~ 61189649 (-) False si:dkey-97a13.12
XM_036985921.1 mRNA upstream 660995 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 660995 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 660995 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 660995 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 660995 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3478917 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3496105 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3531372 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4037268 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4205681 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 701858 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 837510 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3647124 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4174990 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4757919 66101096 ~ 66101627 (-) True G736841

Expression Profile