RNA id: TU830765



Basic Information


Item Value
RNA id TU830765
length 252
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G731439
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61425310 ~ 61478476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctaAAGTATCACCTATAAGGGCTGAAATCAGTAGAATATAACAGAGCAGCATCATGGTCTATGTTACAGAACTGAAATTAATGTGTTATTTAGAAAACAGCAAAGCCAAAACTCTGCTGTGACTCTGAAATGATAAGTAGGCATATACAATATTGCGCTTCCTCTATACATAGGTTTTTAGACACAACCACCAGGTTTCATTCAGTTTGACTGACAGTCGAGGATCCAGACCTGGAGCCCATGATGGAGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830707 lncRNA downstream 44505 61344610 ~ 61380805 (-) True G731383
TU830705 lncRNA downstream 66403 61344114 ~ 61358907 (-) True G731382
TU830704 lncRNA downstream 82133 61342794 ~ 61343177 (-) True G731381
TU830698 lncRNA downstream 99785 61325226 ~ 61325525 (-) True G731375
TU830690 lncRNA downstream 115225 61309575 ~ 61310085 (-) True G731367
TU830852 lncRNA upstream 54264 61532740 ~ 61533370 (-) False G731517
TU830854 lncRNA upstream 54401 61532877 ~ 61570499 (-) True G731518
TU830851 lncRNA upstream 54474 61532950 ~ 61709778 (-) True G731517
TU830860 lncRNA upstream 58387 61536863 ~ 61587972 (-) True G731521
TU830904 lncRNA upstream 116912 61595388 ~ 61696756 (-) True G731558
XM_021613211.2 mRNA downstream 84099 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 185539 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 191880 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 224313 61189832 ~ 61200997 (-) True adhfe1
XM_021613196.2 mRNA downstream 235664 61184992 ~ 61189646 (-) True si:dkey-97a13.12
XM_036985921.1 mRNA upstream 525696 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 525696 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 525696 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 525696 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 525696 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3561433 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3578621 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3613888 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4119784 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4288197 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 566559 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 702211 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3511825 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4039691 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4622620 66101096 ~ 66101627 (-) True G736841

Expression Profile