RNA id: TU830766



Basic Information


Item Value
RNA id TU830766
length 258
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G731440
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61426983 ~ 61427303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgctttgaaatgctggtcatgtctcacatcaacaccattatggCAGAAACcataaacccactccaatttgcataccgccccaacagatccacagatgatgcaatctctattgcactcaacactgccctttaccacctggacgaaaggaacacctatgtgagaacgctattcattgactacagctcagcgttcaacaccatagtgcccttaaagctaatcactaatccccaggtagtaagggtaggtaacaacacacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830707 lncRNA downstream 46178 61344610 ~ 61380805 (-) True G731383
TU830705 lncRNA downstream 68076 61344114 ~ 61358907 (-) True G731382
TU830704 lncRNA downstream 83806 61342794 ~ 61343177 (-) True G731381
TU830698 lncRNA downstream 101458 61325226 ~ 61325525 (-) True G731375
TU830690 lncRNA downstream 116898 61309575 ~ 61310085 (-) True G731367
TU830767 lncRNA upstream 2795 61430098 ~ 61468722 (-) True G731441
TU830777 lncRNA upstream 8081 61435384 ~ 61438529 (-) True G731447
TU830852 lncRNA upstream 105437 61532740 ~ 61533370 (-) False G731517
TU830854 lncRNA upstream 105574 61532877 ~ 61570499 (-) True G731518
TU830851 lncRNA upstream 105647 61532950 ~ 61709778 (-) True G731517
XM_021613211.2 mRNA downstream 85772 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 187212 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 193553 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 225986 61189832 ~ 61200997 (-) True adhfe1
XM_021613196.2 mRNA downstream 237337 61184992 ~ 61189646 (-) True si:dkey-97a13.12
XM_036985921.1 mRNA upstream 576869 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 576869 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 576869 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 576869 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 576869 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3563106 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3580294 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3615561 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4121457 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4289870 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 617732 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 753384 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3562998 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4090864 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4673793 66101096 ~ 66101627 (-) True G736841

Expression Profile