RNA id: TU830767



Basic Information


Item Value
RNA id TU830767
length 287
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G731441
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61430098 ~ 61468722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGTCAGACAGCTGCACCCTCTGGATCGTCAAGGGGACTGATTTGGAGCTGGCATCTAGATCGGCATGAAATCTCTCCTTGAACTCAGTAGCATTGTCCCCAGTTCCAAATTTGAACCGCATAAGCATATACTTGGGGAAGTCGTTTGCTCGCTGTTTGTACCAGAATAGATATGGACCTGAATCATCTGTTTCATAATGACAGACAAGTGTTATTTGTCCTCCTTCAGCAGCCGTCTCAACTCCTTTTggctgtaacactctgtctcctCTGCATTCTGGAGAGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830766 lncRNA downstream 2795 61426983 ~ 61427303 (-) True G731440
TU830707 lncRNA downstream 49293 61344610 ~ 61380805 (-) True G731383
TU830705 lncRNA downstream 71191 61344114 ~ 61358907 (-) True G731382
TU830704 lncRNA downstream 86921 61342794 ~ 61343177 (-) True G731381
TU830698 lncRNA downstream 104573 61325226 ~ 61325525 (-) True G731375
TU830852 lncRNA upstream 64018 61532740 ~ 61533370 (-) False G731517
TU830854 lncRNA upstream 64155 61532877 ~ 61570499 (-) True G731518
TU830851 lncRNA upstream 64228 61532950 ~ 61709778 (-) True G731517
TU830860 lncRNA upstream 68141 61536863 ~ 61587972 (-) True G731521
TU830904 lncRNA upstream 126666 61595388 ~ 61696756 (-) True G731558
XM_021613211.2 mRNA downstream 88887 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 190327 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 196668 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 229101 61189832 ~ 61200997 (-) True adhfe1
XM_021613196.2 mRNA downstream 240452 61184992 ~ 61189646 (-) True si:dkey-97a13.12
XM_036985921.1 mRNA upstream 535450 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 535450 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 535450 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 535450 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 535450 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3566221 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3583409 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3618676 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4124572 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4292985 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 576313 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 711965 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3521579 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4049445 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4632374 66101096 ~ 66101627 (-) True G736841

Expression Profile