RNA id: TU830777



Basic Information


Item Value
RNA id TU830777
length 314
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G731447
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61435384 ~ 61438529 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccattggatgaggtaatgttttggtcctaagtggtaccaagaacAAGATAGGAACTTTGCTTTAGGAGAGCAAACTGAAGGATAATGtatagctaatgctgtctggctatgggatactcctctgaCTAGTAAATCTTCCTTtgtgtaatgttcctaagatctgtgttatttgtcatgtgagttgagaggggtgtgtattggctataaatgatactaagaactgttttgtaagcactctcagagaattcagttacagacactgaattgatctgagagtcaaacagggctatggtgaagctcatgtataattaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830766 lncRNA downstream 8081 61426983 ~ 61427303 (-) True G731440
TU830707 lncRNA downstream 54579 61344610 ~ 61380805 (-) True G731383
TU830705 lncRNA downstream 76477 61344114 ~ 61358907 (-) True G731382
TU830704 lncRNA downstream 92207 61342794 ~ 61343177 (-) True G731381
TU830698 lncRNA downstream 109859 61325226 ~ 61325525 (-) True G731375
TU830852 lncRNA upstream 94211 61532740 ~ 61533370 (-) False G731517
TU830854 lncRNA upstream 94348 61532877 ~ 61570499 (-) True G731518
TU830851 lncRNA upstream 94421 61532950 ~ 61709778 (-) True G731517
TU830860 lncRNA upstream 98334 61536863 ~ 61587972 (-) True G731521
TU830904 lncRNA upstream 156859 61595388 ~ 61696756 (-) True G731558
XM_021613211.2 mRNA downstream 94173 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 195613 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 201954 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 234387 61189832 ~ 61200997 (-) True adhfe1
XM_021613196.2 mRNA downstream 245738 61184992 ~ 61189646 (-) True si:dkey-97a13.12
XM_036985921.1 mRNA upstream 565643 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 565643 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 565643 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 565643 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 565643 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3571507 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3588695 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3623962 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4129858 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4298271 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 606506 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 742158 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3551772 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 4079638 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4662567 66101096 ~ 66101627 (-) True G736841

Expression Profile