RNA id: TU830984



Basic Information


Item Value
RNA id TU830984
length 281
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G731625
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61700862 ~ 61706841 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aaaagagaaagagaacaagagaggtcttagctgtggtcttcaggcgtgcaggtgtactgtctgactgtccgatggtttgtatgttaaagcttcgcaacaatgttgctactaatccatgcgatccataacgggcgtggtcccaaacaaaaacaaccacgacctagagcgattacaccgatgattgagttaaatactctataaactacacacgctgaaaacaaacaaaacttctgcagcacagcacacacaatcaaactgtcgcgccaccaaagagcccctcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830904 lncRNA downstream 4106 61595388 ~ 61696756 (-) True G731558
TU830936 lncRNA downstream 74441 61625754 ~ 61626421 (-) True G731580
TU830860 lncRNA downstream 112890 61536863 ~ 61587972 (-) True G731521
TU830854 lncRNA downstream 130363 61532877 ~ 61570499 (-) True G731518
TU830852 lncRNA downstream 167492 61532740 ~ 61533370 (-) False G731517
TU830783 lncRNA upstream 1993 61708834 ~ 61716216 (-) True G731452
TU830989 lncRNA upstream 4056 61710897 ~ 61871555 (-) True G731629
TU831090 lncRNA upstream 163339 61870180 ~ 61873916 (-) True G731726
TU831144 lncRNA upstream 235150 61941991 ~ 61988000 (-) True G731765
TU831142 lncRNA upstream 338194 62045035 ~ 62047266 (-) True G731764
XM_021613211.2 mRNA downstream 359651 61340002 ~ 61341211 (-) True LOC110530281
XM_021611264.2 mRNA downstream 461091 61233873 ~ 61239771 (-) True LOC110529124
XM_021613198.2 mRNA downstream 467432 61221771 ~ 61233430 (-) True LOC110530276
XM_021613197.2 mRNA downstream 499865 61189832 ~ 61200997 (-) True adhfe1
XM_021613196.2 mRNA downstream 511216 61184992 ~ 61189646 (-) True si:dkey-97a13.12
XM_036985921.1 mRNA upstream 297331 62004172 ~ 62033971 (-) False LOC110530300
XM_036985922.1 mRNA upstream 297331 62004172 ~ 62033971 (-) False LOC110530300
XM_021613220.2 mRNA upstream 297331 62004172 ~ 62033993 (-) False LOC110530300
XM_021613222.2 mRNA upstream 297331 62004172 ~ 62033993 (-) False LOC110530300
XM_036985923.1 mRNA upstream 297331 62004172 ~ 62033993 (-) False LOC110530300
TU825771 other downstream 3836985 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 3854173 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 3889440 57805388 ~ 57811422 (-) True G726885
TU825404 other downstream 4395336 57286516 ~ 57305526 (-) True chd7
TU825323 other downstream 4563749 57136141 ~ 57137113 (-) True G726496
TU831141 other upstream 338194 62045035 ~ 62048119 (-) False G731764
TU831229 other upstream 473846 62180687 ~ 62185180 (-) True LOC110530961
TU835604 other upstream 3283460 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 3811326 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 4394255 66101096 ~ 66101627 (-) True G736841

Expression Profile