RNA id: TU832671



Basic Information


Item Value
RNA id TU832671
length 204
lncRNA type intronic
GC content 0.51
exon number 1
gene id G733215
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63192288 ~ 63192491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtagcattctcctggcatccgccaaacacagatttgtccgtcgtactgccagatggtgaagcgtgattcatcacttcagagaacccgtttccactgctccagagtccaacggcGGCGAGCTTTAAAACCACAATGcttggtattgcgcatggtgatcttaggcttgtgtgcggctgctcggccatgaaaacccatttcatgaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU832444 lncRNA downstream 113095 62999232 ~ 63079193 (-) True G733000
TU832351 lncRNA downstream 326370 62864614 ~ 62865918 (-) True G732910
TU831743 lncRNA downstream 577183 62614811 ~ 62615105 (-) True G732337
TU831538 lncRNA downstream 721140 62470921 ~ 62471148 (-) True G732140
TU831438 lncRNA downstream 793829 62398239 ~ 62398459 (-) True G732041
TU832687 lncRNA upstream 9759 63202250 ~ 63208657 (-) True G733226
TU832729 lncRNA upstream 71263 63263754 ~ 63263967 (-) True G733260
TU832730 lncRNA upstream 71553 63264044 ~ 63264455 (-) True G733261
TU832731 lncRNA upstream 72580 63265071 ~ 63265277 (-) True G733262
TU832732 lncRNA upstream 72800 63265291 ~ 63265581 (-) True G733263
XM_036985949.1 mRNA downstream 224803 62882950 ~ 62967485 (-) True LOC110530309
XM_021613236.2 mRNA downstream 584522 62513304 ~ 62607766 (-) True LOC110530307
XM_021613234.2 mRNA downstream 879795 62299897 ~ 62312493 (-) True LOC110530306
XM_036985938.1 mRNA downstream 880529 62299897 ~ 62311759 (-) False LOC110530306
XM_021613235.2 mRNA downstream 889746 62299897 ~ 62302542 (-) False LOC110530306
XM_036985951.1 mRNA upstream 16541 63209032 ~ 63239830 (-) True LOC110530312
XM_021613248.2 mRNA upstream 99952 63292443 ~ 63294703 (-) True LOC110530314
XM_021613250.2 mRNA upstream 283301 63475792 ~ 63494724 (-) False LOC110530317
XM_021613251.2 mRNA upstream 283301 63475792 ~ 63494725 (-) True LOC110530317
XM_021613254.2 mRNA upstream 355088 63547579 ~ 63561814 (-) True kiss1ra
TU831229 other downstream 1007108 62180687 ~ 62185180 (-) True LOC110530961
TU831141 other downstream 1144169 62045035 ~ 62048119 (-) False G731764
TU825771 other downstream 5328411 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 5345599 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 5380866 57805388 ~ 57811422 (-) True G726885
TU835604 other upstream 1797810 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 2325676 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 2908605 66101096 ~ 66101627 (-) True G736841
TU836773 other upstream 3001163 66193654 ~ 66209991 (-) False LOC110530385
TU837419 other upstream 3366705 66559196 ~ 66560517 (-) True G737449

Expression Profile