RNA id: TU832732



Basic Information


Item Value
RNA id TU832732
length 291
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G733263
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63265291 ~ 63265581 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tctctggagagacctgaaaataactgtgcagcaatgctccccaccCAACCTGAGAAAGCCTGAGAGGATCttagaagaatgggataaactccccaaatacagatgtgccaagcttgtagcatcataccccaaAATACTTGaggttgtaattgctgccaaaggtgcttcaacaaagtacggcataaagggtctgaatacttatataaatgtgatatttccgtttatAATTTTTAAAAGATTAGCTCacgtttctaaaaacctgtttttgctttgtcattatggagtatagTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU832731 lncRNA downstream 14 63265071 ~ 63265277 (-) True G733262
TU832730 lncRNA downstream 836 63264044 ~ 63264455 (-) True G733261
TU832729 lncRNA downstream 1324 63263754 ~ 63263967 (-) True G733260
TU832687 lncRNA downstream 56634 63202250 ~ 63208657 (-) True G733226
TU832671 lncRNA downstream 72800 63192288 ~ 63192491 (-) True G733215
TU832733 lncRNA upstream 1060 63266641 ~ 63266941 (-) True G733264
TU832739 lncRNA upstream 9864 63275445 ~ 63275658 (-) True G733270
TU832714 lncRNA upstream 20279 63285860 ~ 63286375 (-) True G733245
TU832711 lncRNA upstream 23103 63288684 ~ 63330595 (-) True G733242
TU832772 lncRNA upstream 72400 63337981 ~ 63338202 (-) True G733303
XM_036985951.1 mRNA downstream 25461 63209032 ~ 63239830 (-) True LOC110530312
XM_036985949.1 mRNA downstream 297806 62882950 ~ 62967485 (-) True LOC110530309
XM_021613236.2 mRNA downstream 657525 62513304 ~ 62607766 (-) True LOC110530307
XM_021613234.2 mRNA downstream 952798 62299897 ~ 62312493 (-) True LOC110530306
XM_036985938.1 mRNA downstream 953532 62299897 ~ 62311759 (-) False LOC110530306
XM_021613248.2 mRNA upstream 26862 63292443 ~ 63294703 (-) True LOC110530314
XM_021613250.2 mRNA upstream 210211 63475792 ~ 63494724 (-) False LOC110530317
XM_021613251.2 mRNA upstream 210211 63475792 ~ 63494725 (-) True LOC110530317
XM_021613254.2 mRNA upstream 281998 63547579 ~ 63561814 (-) True kiss1ra
XM_021614248.2 mRNA upstream 506102 63771683 ~ 63777609 (-) True LOC110530962
TU831229 other downstream 1080111 62180687 ~ 62185180 (-) True LOC110530961
TU831141 other downstream 1217172 62045035 ~ 62048119 (-) False G731764
TU825771 other downstream 5401414 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 5418602 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 5453869 57805388 ~ 57811422 (-) True G726885
TU835604 other upstream 1724720 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 2252586 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 2835515 66101096 ~ 66101627 (-) True G736841
TU836773 other upstream 2928073 66193654 ~ 66209991 (-) False LOC110530385
TU837419 other upstream 3293615 66559196 ~ 66560517 (-) True G737449

Expression Profile