RNA id: TCONS_00003597


Basic Information

Item Value
RNA id TCONS_00003597
length 117
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_001797
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 1664922 ~ 1665038 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatgtcaccctgcagccgaATACCggctactcactgaagctaagcagggctacgcctggtcagtacctggatgggagaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192491

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00005803 lncRNA upstream 124190 1538299 ~ 1540732 (+) True XLOC_001794
TCONS_00005667 lncRNA upstream 727880 883086 ~ 937042 (+) True XLOC_001791
TCONS_00005801 lncRNA upstream 775610 859355 ~ 889312 (+) False XLOC_001791
TCONS_00005802 lncRNA upstream 775610 877519 ~ 889312 (+) False XLOC_001791
TCONS_00005799 lncRNA upstream 868028 733804 ~ 796894 (+) False XLOC_001789
TCONS_00005668 lncRNA downstream 33027 1698065 ~ 1713235 (+) True XLOC_001799
TCONS_00005804 lncRNA downstream 38867 1703905 ~ 1712770 (+) False XLOC_001800
TCONS_00005805 lncRNA downstream 43077 1708115 ~ 1712770 (+) True XLOC_001800
TCONS_00005806 lncRNA downstream 239317 1904355 ~ 1921020 (+) True XLOC_001803
TCONS_00005669 lncRNA downstream 301819 1966857 ~ 1991163 (+) False XLOC_001804
TCONS_00003593 mRNA upstream 73819 1590604 ~ 1591103 (+) True XLOC_001795
TCONS_00003592 mRNA upstream 250761 1396940 ~ 1414161 (+) True XLOC_001793
TCONS_00003591 mRNA upstream 557364 1052591 ~ 1107558 (+) True XLOC_001792
TCONS_00003589 mRNA upstream 1073075 589501 ~ 591847 (+) False XLOC_001788
TCONS_00003586 mRNA upstream 1074839 573667 ~ 590083 (+) False XLOC_001788
TCONS_00003598 mRNA downstream 3068 1668106 ~ 1675362 (+) True XLOC_001796
TCONS_00003599 mRNA downstream 16480 1681518 ~ 1684882 (+) True XLOC_001798
TCONS_00003600 mRNA downstream 184836 1849874 ~ 1892146 (+) False XLOC_001801
TCONS_00003601 mRNA downstream 184836 1849874 ~ 1893095 (+) True XLOC_001801
TCONS_00003602 mRNA downstream 234557 1899595 ~ 1900662 (+) True XLOC_001802
TCONS_00003590 other upstream 859563 805244 ~ 805359 (+) True XLOC_001790
TCONS_00003583 other upstream 1157666 506563 ~ 507256 (+) True XLOC_001784
TCONS_00003569 other upstream 1452975 211782 ~ 211947 (+) True XLOC_001770
TCONS_00003605 other downstream 510545 2175583 ~ 2267357 (+) False XLOC_001805
TCONS_00003616 other downstream 1023527 2688565 ~ 2688681 (+) True XLOC_001815
TCONS_00003633 other downstream 1320006 2985044 ~ 3026523 (+) True XLOC_001822
TCONS_00003646 other downstream 1743745 3408783 ~ 3408900 (+) True XLOC_001830
TCONS_00003658 other downstream 2828239 4493277 ~ 4493358 (+) True XLOC_001842