RNA id: TU834438



Basic Information


Item Value
RNA id TU834438
length 315
lncRNA type antisense_over
GC content 0.51
exon number 2
gene id G734830
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64546445 ~ 64549891 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgAGAACAAAGACAGACGACCAAAACCCATATGTACCACTTTGGAATCGATAGCCACTTGTGCAAAGCCCTTTCTCTTCCCCCAGACCAGTGGATAGGTCTCGTCACTGAGGAGGGCTTCCCTCACGCCTCCAGGTGAGATGCCCAGGAGGTGGCCACTTTTTAGGGCCTTCACACACTCCTCCTGGGGCCCGTGGATGACACTGAACACCTCCAACAGCAGCTTGAACCCTACAGAGAACAATAAAAGGTCCTGCTTTTAGGGTCTAAGTGGCTCATGTAGTAAGAATGGACTATGGCAACTATAGGCTATACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU834441 lncRNA downstream 43166 64502361 ~ 64503279 (-) True G734833
TU834500 lncRNA downstream 45492 64498293 ~ 64500953 (-) False G734886
TU834499 lncRNA downstream 45492 64498338 ~ 64500953 (-) True G734886
TU834153 lncRNA downstream 185680 64360322 ~ 64360765 (-) True G734574
TU834142 lncRNA downstream 193020 64352841 ~ 64353425 (-) True G734564
TU834506 lncRNA upstream 20261 64570152 ~ 64570636 (-) True G734892
TU834507 lncRNA upstream 20940 64570831 ~ 64571111 (-) True G734893
TU834531 lncRNA upstream 51709 64601600 ~ 64601960 (-) True G734917
TU834534 lncRNA upstream 55655 64605546 ~ 64605943 (-) True G734920
TU834550 lncRNA upstream 65469 64615360 ~ 64615560 (-) True G734930
XR_002474507.2 mRNA downstream 1860 64539032 ~ 64544585 (-) False LOC110530333
XR_002474508.2 mRNA downstream 1860 64539032 ~ 64544585 (-) True LOC110530333
XR_005052930.1 mRNA downstream 7477 64532271 ~ 64538968 (-) True LOC118965543
XM_021613294.2 mRNA downstream 17777 64511556 ~ 64528668 (-) True LOC110530332
XM_021613293.2 mRNA downstream 22988 64511556 ~ 64523457 (-) False LOC110530332
XM_021613300.2 mRNA upstream 7406 64557297 ~ 64620048 (-) True LOC110530335
XM_021613301.2 mRNA upstream 81054 64630945 ~ 64640936 (-) False LOC110530336
XM_021613302.2 mRNA upstream 81054 64630945 ~ 64640936 (-) False LOC110530336
XM_021613303.2 mRNA upstream 81054 64630945 ~ 64640936 (-) False LOC110530336
XM_021613304.2 mRNA upstream 81054 64630945 ~ 64640936 (-) False LOC110530336
TU831229 other downstream 2361265 62180687 ~ 62185180 (-) True LOC110530961
TU831141 other downstream 2498326 62045035 ~ 62048119 (-) False G731764
TU825771 other downstream 6682568 57862738 ~ 57863877 (-) True LOC110530228
TU825774 other downstream 6699756 57820047 ~ 57846689 (-) True G726900
TU825750 other downstream 6735023 57805388 ~ 57811422 (-) True G726885
TU835604 other upstream 440410 64990301 ~ 65040241 (-) True G735880
TU835971 other upstream 968276 65518167 ~ 65528583 (-) True G736216
TU836724 other upstream 1551205 66101096 ~ 66101627 (-) True G736841
TU836773 other upstream 1643763 66193654 ~ 66209991 (-) False LOC110530385
TU837419 other upstream 2009305 66559196 ~ 66560517 (-) True G737449

Expression Profile