RNA id: TU836842



Basic Information


Item Value
RNA id TU836842
length 322
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G736950
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66261281 ~ 66261602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agcGATAGCTTTCTCAGAAAACTGAGAATTGACCCGGAACAAAGTGCACTCGCAACAAACCAGTATATCTAGATTGAAGGTGCCTCAGTCAGAGCACATTTTTCAGGTAAGGTTTGAAAGTGGATGAGGTGAATCATGTAGTGCGGgtacacgcgcgcacacacacacaagttgtaTGGACTACTGAGCATCATTGTGTAACAGTATCTTGTGATACAGAGAGCTCTTACTGTGAACAAATATTTTGAGTCGGTGGATTACATTTAGGATGTTGGATAAATAGCATGTAATCGCGTCATTAAGCAATTGGGGACGTTATGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU836805 lncRNA downstream 41459 66219407 ~ 66219822 (-) True G736918
TU836772 lncRNA downstream 51290 66204304 ~ 66209991 (-) True LOC110530385
TU836802 lncRNA downstream 53570 66207421 ~ 66207711 (-) True G736915
TU836774 lncRNA downstream 61354 66198228 ~ 66199927 (-) True G736888
TU836780 lncRNA downstream 92219 66168482 ~ 66169062 (-) True G736893
TU836843 lncRNA upstream 851 66262453 ~ 66262663 (-) True G736951
TU836847 lncRNA upstream 5566 66267168 ~ 66267430 (-) True G736955
TU836831 lncRNA upstream 8223 66269825 ~ 66270278 (-) True G736944
TU836850 lncRNA upstream 14850 66276452 ~ 66276756 (-) True G736958
TU836855 lncRNA upstream 24161 66285763 ~ 66286198 (-) True G736963
XM_021613384.2 mRNA downstream 51253 66192359 ~ 66210028 (-) False LOC110530385
XM_021613383.2 mRNA downstream 51253 66204435 ~ 66210028 (-) False LOC110530385
XM_036986002.1 mRNA downstream 164330 66076814 ~ 66096951 (-) False LOC110530374
XM_021613388.2 mRNA upstream 12186 66273788 ~ 66332260 (-) False LOC110530388
XM_036986007.1 mRNA upstream 12186 66273788 ~ 66332261 (-) True LOC110530388
XM_021613393.2 mRNA upstream 76668 66338270 ~ 66365785 (-) False LOC110530389
XM_021613390.2 mRNA upstream 76668 66338270 ~ 66365787 (-) False LOC110530389
XM_021613392.2 mRNA upstream 76668 66338270 ~ 66365787 (-) False LOC110530389
TU836773 other downstream 51290 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 159654 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 732698 65518167 ~ 65528583 (-) True G736216
TU835604 other downstream 1221040 64990301 ~ 65040241 (-) True G735880
TU831229 other downstream 4076101 62180687 ~ 62185180 (-) True LOC110530961
TU837419 other upstream 297594 66559196 ~ 66560517 (-) True G737449
TU837387 other upstream 452091 66713693 ~ 66714496 (-) True G737422
TU838543 other upstream 1119618 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 1159137 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 1162261 67423863 ~ 67425339 (-) False G738504

Expression Profile