RNA id: TU837357


Basic Information

Item Value
RNA id TU837357
length 275
lncRNA type antisense_over
GC content 0.54
exon number 1
gene id G737406
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66505064 ~ 66505338 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTGAGAGAGGATTGCAGGTATTGCCAGTCTTCTGGTTCATCTCATCCTCCACCGCACTGCTGATGTTGGTGGTCTGGCTATGGGGGATCCCTACTAGTGAAGTTGGTTGTACagggctggttaacactgactCCTCATCTTCACTGGAGTAAAAAGGAGAATAGGCTGAGCTCATCAGGCCCTGAGACTCTGTGTTCTGCCCATCTCCCTGTGCTCTGGAGCTCTGGCCTCTGGCCCTGCGGACATGTCTCTGGGATGGATTGGTTTCCTCTGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU837356 lncRNA downstream 577 66504262 ~ 66504487 (-) True G737405
TU837355 lncRNA downstream 1355 66503482 ~ 66503709 (-) True G737404
TU836867 lncRNA downstream 198975 66305819 ~ 66306089 (-) True G736973
TU836862 lncRNA downstream 204943 66294377 ~ 66300121 (-) True G736968
TU836855 lncRNA downstream 218866 66285763 ~ 66286198 (-) True G736963
TU837358 lncRNA upstream 1537 66506875 ~ 66507076 (-) True G737407
TU837394 lncRNA upstream 13157 66518495 ~ 66596241 (-) False G737426
TU837364 lncRNA upstream 36492 66541830 ~ 66551319 (-) True G737411
TU837391 lncRNA upstream 82834 66588172 ~ 66596241 (-) False G737426
TU837392 lncRNA upstream 85000 66590338 ~ 66596241 (-) True G737426
XM_021613396.2 mRNA downstream 71339 66390204 ~ 66433725 (-) True LOC110530391
XM_021613395.2 mRNA downstream 71340 66390204 ~ 66433724 (-) False LOC110530391
XM_021613399.2 mRNA downstream 71340 66390204 ~ 66433724 (-) False LOC110530391
XM_021613397.2 mRNA downstream 87057 66390204 ~ 66418007 (-) False LOC110530391
XM_021613394.2 mRNA downstream 123334 66338270 ~ 66381730 (-) True LOC110530389
LOC118965631 mRNA upstream 104965 66610303 ~ 66618598 (-) True LOC118965631
LOC110530964 mRNA upstream 118175 66623513 ~ 66632180 (-) True LOC110530964
LOC118936436 mRNA upstream 128587 66633925 ~ 66636934 (-) True LOC118936436
XM_021613409.2 mRNA upstream 144525 66649863 ~ 66658816 (-) True LOC110530394
XM_021613411.2 mRNA upstream 167122 66672460 ~ 66682940 (-) False elovl1a
TU836773 other downstream 295073 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 403437 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 976481 65518167 ~ 65528583 (-) True G736216
TU835604 other downstream 1464823 64990301 ~ 65040241 (-) True G735880
TU831229 other downstream 4319884 62180687 ~ 62185180 (-) True LOC110530961
TU837419 other upstream 53858 66559196 ~ 66560517 (-) True G737449
TU837387 other upstream 208355 66713693 ~ 66714496 (-) True G737422
TU838543 other upstream 875882 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 915401 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 918525 67423863 ~ 67425339 (-) False G738504

Expression Profile