RNA id: TU837358


Basic Information

Item Value
RNA id TU837358
length 202
lncRNA type intronic
GC content 0.36
exon number 1
gene id G737407
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66506875 ~ 66507076 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggcacacacactggggagccaggcccagccaattagaacaagtttttcctcacaaaaggcCTTTATTACCGACAGAAATACACCctttgagagaaatacactttttatGCATATGTAAAATGTTTGGGAgtttttatttcaactcatgaaacaagggaacactttacatgttgcatttatattttttgttcagtataaatac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU837357 lncRNA downstream 1537 66505064 ~ 66505338 (-) True G737406
TU837356 lncRNA downstream 2388 66504262 ~ 66504487 (-) True G737405
TU837355 lncRNA downstream 3166 66503482 ~ 66503709 (-) True G737404
TU836867 lncRNA downstream 200786 66305819 ~ 66306089 (-) True G736973
TU836862 lncRNA downstream 206754 66294377 ~ 66300121 (-) True G736968
TU837394 lncRNA upstream 11419 66518495 ~ 66596241 (-) False G737426
TU837364 lncRNA upstream 34754 66541830 ~ 66551319 (-) True G737411
TU837391 lncRNA upstream 81096 66588172 ~ 66596241 (-) False G737426
TU837392 lncRNA upstream 83262 66590338 ~ 66596241 (-) True G737426
TU837434 lncRNA upstream 91191 66598267 ~ 66598698 (-) True G737462
XM_021613396.2 mRNA downstream 73150 66390204 ~ 66433725 (-) True LOC110530391
XM_021613395.2 mRNA downstream 73151 66390204 ~ 66433724 (-) False LOC110530391
XM_021613399.2 mRNA downstream 73151 66390204 ~ 66433724 (-) False LOC110530391
XM_021613397.2 mRNA downstream 88868 66390204 ~ 66418007 (-) False LOC110530391
XM_021613394.2 mRNA downstream 125145 66338270 ~ 66381730 (-) True LOC110530389
LOC118965631 mRNA upstream 103227 66610303 ~ 66618598 (-) True LOC118965631
LOC110530964 mRNA upstream 116437 66623513 ~ 66632180 (-) True LOC110530964
LOC118936436 mRNA upstream 126849 66633925 ~ 66636934 (-) True LOC118936436
XM_021613409.2 mRNA upstream 142787 66649863 ~ 66658816 (-) True LOC110530394
XM_021613411.2 mRNA upstream 165384 66672460 ~ 66682940 (-) False elovl1a
TU836773 other downstream 296884 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 405248 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 978292 65518167 ~ 65528583 (-) True G736216
TU835604 other downstream 1466634 64990301 ~ 65040241 (-) True G735880
TU831229 other downstream 4321695 62180687 ~ 62185180 (-) True LOC110530961
TU837419 other upstream 52120 66559196 ~ 66560517 (-) True G737449
TU837387 other upstream 206617 66713693 ~ 66714496 (-) True G737422
TU838543 other upstream 874144 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 913663 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 916787 67423863 ~ 67425339 (-) False G738504

Expression Profile