RNA id: TU837387



Basic Information


Item Value
RNA id TU837387
length 804
RNA type TUCP
GC content 0.61
exon number 1
gene id G737422
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66713693 ~ 66714496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGACCGTCACAGCCCACATTTACATAGTTTTGCGTCAGTCCCCTGGAGCAGGAGGCTCATGCTACAATGTGTTAATCAGGGGAGTGCTAGGTGGCCACATCATCACGTGGCAGGTTGAGCCTcacagcccctccccctgccGAGGAGGCGGTATAGCATGCCGTGGCGGAGGTGGGGCCATTGGTCTCCATGGTGAAGAGCTTGAAGGTCCCTGGGGGTGCGGGGTCAGGAGAAGCATCCCGCTCGGGGCTGGATGCCCGGGATGACCCAGGTGAGGCTGAGGGGCTGAGCTGTACTGCTGTCGTGTCCTGCAATGTGTGCTCACTCGTCTCAATCTCAAACGTCACTCCCCCGGCTAAACCTCCACGCCCCATCATCCCCATGCTCCTTCCGCCCACATTAGACCTCCGGGAGCCCTGGGCAGGGGGCAGGCGGCTGCAGACACAGCACGCCCCGAAGAAAGAGAAGGCCACCAGAAGCAGGATGGGCCCTATGATGATGGGAGGGTTGGTAGAGGGCACCATGGTGCTGAAGGCAAACGCCCCCACCAGGGTGATGTTGATGCCTGCCAGCATGATGCACAAGCCACACGCGCAGCACAGCGCCGGGGAGGGCAGGCCATGGGGGCGGGATGCCCTCTTCTTCGGTTCCTTCTTCTTGGGCCCAGGAGTGCTGGAGCTCCTGTCAGTGATGACCATCTCTTCTTCTGCACCGCAAGGctgccttttctctccctctctctccccttctctctctatccttcagCCAGGACTATTCCCCTTGGCAACAGACCACCGACGAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU837490 lncRNA downstream 5783 66706688 ~ 66707910 (-) False G737512
TU837489 lncRNA downstream 5783 66707038 ~ 66707910 (-) True G737512
TU837487 lncRNA downstream 5839 66707038 ~ 66707854 (-) False G737512
TU837479 lncRNA downstream 19525 66693929 ~ 66694168 (-) True G737504
TU837478 lncRNA downstream 26070 66687091 ~ 66687623 (-) True G737503
TU837384 lncRNA upstream 6286 66720782 ~ 66723020 (-) True G737419
TU837388 lncRNA upstream 9323 66723819 ~ 66724497 (-) True G737423
TU837564 lncRNA upstream 113767 66828263 ~ 66828491 (-) True G737582
TU837567 lncRNA upstream 117449 66831945 ~ 66832150 (-) True G737585
TU837591 lncRNA upstream 153079 66867575 ~ 66868185 (-) True G737609
XM_021613410.2 mRNA downstream 30746 66672460 ~ 66682947 (-) True elovl1a
XM_021613411.2 mRNA downstream 30753 66672460 ~ 66682940 (-) False elovl1a
XM_021613412.2 mRNA downstream 30753 66672460 ~ 66682940 (-) False elovl1a
XM_021613409.2 mRNA downstream 54877 66649863 ~ 66658816 (-) True LOC110530394
LOC118936436 mRNA downstream 76759 66633925 ~ 66636934 (-) True LOC118936436
NM_001124314.1 mRNA upstream 84047 66798543 ~ 66801779 (-) True gs02
XM_036986028.1 mRNA upstream 340662 67055158 ~ 67126011 (-) False LOC110530968
XM_036986027.1 mRNA upstream 340662 67055158 ~ 67176150 (-) False LOC110530968
XR_005052935.1 mRNA upstream 341875 67056371 ~ 67176168 (-) True LOC110530968
XM_021613428.2 mRNA upstream 763496 67477992 ~ 67528795 (-) False LOC110530404
TU837419 other downstream 153176 66559196 ~ 66560517 (-) True G737449
TU836773 other downstream 503702 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 612066 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 1185110 65518167 ~ 65528583 (-) True G736216
TU835604 other downstream 1673452 64990301 ~ 65040241 (-) True G735880
TU838543 other upstream 666724 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 706243 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 709367 67423863 ~ 67425339 (-) False G738504
TU840819 other upstream 2435847 69150343 ~ 69157726 (-) True igfbp1
TU841006 other upstream 2694472 69408968 ~ 69430653 (-) False G740718

Expression Profile