RNA id: TU837567


Basic Information

Item Value
RNA id TU837567
length 206
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G737585
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66831945 ~ 66832150 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtcgctaggtgtacggtgtttcctccgaaaacattggtgcagctggcttctgggttggatgtgcgttgtgtcaagaagcagtgcggcttggttgggttgtgtttcggaggacgcatggctctcgaccttcgcctctcttgtgttcgtacgggagttgcagcgatgagacaagacagtaactactactaattggataccacggaaa

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU837564 lncRNA downstream 3454 66828263 ~ 66828491 (-) True G737582
TU837388 lncRNA downstream 107448 66723819 ~ 66724497 (-) True G737423
TU837384 lncRNA downstream 108925 66720782 ~ 66723020 (-) True G737419
TU837490 lncRNA downstream 124035 66706688 ~ 66707910 (-) False G737512
TU837591 lncRNA upstream 35425 66867575 ~ 66868185 (-) True G737609
TU837645 lncRNA upstream 104183 66936333 ~ 66936535 (-) True G737655
TU837915 lncRNA upstream 203212 67035362 ~ 67035667 (-) True G737897
TU837920 lncRNA upstream 210370 67042520 ~ 67131875 (-) True G737902
TU837950 lncRNA upstream 264824 67096974 ~ 67097603 (-) True G737923
NM_001124314.1 mRNA downstream 30166 66798543 ~ 66801779 (-) True gs02
XM_021613410.2 mRNA downstream 148998 66672460 ~ 66682947 (-) True elovl1a
XM_021613411.2 mRNA downstream 149005 66672460 ~ 66682940 (-) False elovl1a
XM_021613412.2 mRNA downstream 149005 66672460 ~ 66682940 (-) False elovl1a
XM_021613409.2 mRNA downstream 173129 66649863 ~ 66658816 (-) True LOC110530394
XM_036986028.1 mRNA upstream 223008 67055158 ~ 67126011 (-) False LOC110530968
XM_036986027.1 mRNA upstream 223008 67055158 ~ 67176150 (-) False LOC110530968
XR_005052935.1 mRNA upstream 224221 67056371 ~ 67176168 (-) True LOC110530968
XM_021613428.2 mRNA upstream 645842 67477992 ~ 67528795 (-) False LOC110530404
XM_036986041.1 mRNA upstream 682926 67515076 ~ 67528795 (-) True LOC110530404
TU837387 other downstream 117449 66713693 ~ 66714496 (-) True G737422
TU837419 other downstream 271428 66559196 ~ 66560517 (-) True G737449
TU836773 other downstream 621954 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 730318 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 1303362 65518167 ~ 65528583 (-) True G736216
TU838543 other upstream 549070 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 588589 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 591713 67423863 ~ 67425339 (-) False G738504
TU840819 other upstream 2318193 69150343 ~ 69157726 (-) True igfbp1
TU841006 other upstream 2576818 69408968 ~ 69430653 (-) False G740718

Expression Profile