RNA id: TU837645



Basic Information


Item Value
RNA id TU837645
length 203
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G737655
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66936333 ~ 66936535 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cttcttacatcagctgatgtcacaacgtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcaccggtggctaggaaaaactccctagaaaggccagaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtgccgggtggagattataacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU837591 lncRNA downstream 68148 66867575 ~ 66868185 (-) True G737609
TU837567 lncRNA downstream 104183 66831945 ~ 66832150 (-) True G737585
TU837564 lncRNA downstream 107842 66828263 ~ 66828491 (-) True G737582
TU837388 lncRNA downstream 211836 66723819 ~ 66724497 (-) True G737423
TU837384 lncRNA downstream 213313 66720782 ~ 66723020 (-) True G737419
TU837915 lncRNA upstream 98827 67035362 ~ 67035667 (-) True G737897
TU837920 lncRNA upstream 105985 67042520 ~ 67131875 (-) True G737902
TU837950 lncRNA upstream 160439 67096974 ~ 67097603 (-) True G737923
TU838051 lncRNA upstream 295747 67232282 ~ 67232497 (-) True G738022
TU838068 lncRNA upstream 303350 67239885 ~ 67240107 (-) True G738039
NM_001124314.1 mRNA downstream 134554 66798543 ~ 66801779 (-) True gs02
XM_021613410.2 mRNA downstream 253386 66672460 ~ 66682947 (-) True elovl1a
XM_021613411.2 mRNA downstream 253393 66672460 ~ 66682940 (-) False elovl1a
XM_021613412.2 mRNA downstream 253393 66672460 ~ 66682940 (-) False elovl1a
XM_021613409.2 mRNA downstream 277517 66649863 ~ 66658816 (-) True LOC110530394
XM_036986028.1 mRNA upstream 118623 67055158 ~ 67126011 (-) False LOC110530968
XM_036986027.1 mRNA upstream 118623 67055158 ~ 67176150 (-) False LOC110530968
XR_005052935.1 mRNA upstream 119836 67056371 ~ 67176168 (-) True LOC110530968
XM_021613428.2 mRNA upstream 541457 67477992 ~ 67528795 (-) False LOC110530404
XM_036986041.1 mRNA upstream 578541 67515076 ~ 67528795 (-) True LOC110530404
TU837387 other downstream 221837 66713693 ~ 66714496 (-) True G737422
TU837419 other downstream 375816 66559196 ~ 66560517 (-) True G737449
TU836773 other downstream 726342 66193654 ~ 66209991 (-) False LOC110530385
TU836724 other downstream 834706 66101096 ~ 66101627 (-) True G736841
TU835971 other downstream 1407750 65518167 ~ 65528583 (-) True G736216
TU838543 other upstream 444685 67381220 ~ 67381977 (-) True G738472
TU838577 other upstream 484204 67420739 ~ 67421056 (-) True G738502
TU838580 other upstream 487328 67423863 ~ 67425339 (-) False G738504
TU840819 other upstream 2213808 69150343 ~ 69157726 (-) True igfbp1
TU841006 other upstream 2472433 69408968 ~ 69430653 (-) False G740718

Expression Profile