RNA id: TU841731



Basic Information


Item Value
RNA id TU841731
length 229
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G741400
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70034207 ~ 70034435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TAATTACTAAttgaactatactgaacaaaaatataaacgcaacatgtaaagtgttggtcccatgtttcatgagctgaaataaaagatcccagtaaTGTTCCATTATTTCTCACACatttggtgcacaaatttgtttacatcccagtaagtgagcatttcttctttgtcaagataatccatccacctgacaggtgtagcatatcagcaggatcattacacaggtgcatct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU841724 lncRNA downstream 8092 70025521 ~ 70026115 (-) True G741393
TU841699 lncRNA downstream 34342 69999417 ~ 69999865 (-) True G741368
TU841697 lncRNA downstream 35444 69998416 ~ 69998763 (-) True G741366
TU841696 lncRNA downstream 36279 69997664 ~ 69997928 (-) True G741365
TU841539 lncRNA downstream 188394 69845584 ~ 69845813 (-) True G741212
TU841737 lncRNA upstream 6617 70041052 ~ 70041283 (-) True G741406
TU841749 lncRNA upstream 13900 70048335 ~ 70048592 (-) True G741418
TU841751 lncRNA upstream 15308 70049743 ~ 70049974 (-) True G741420
TU842114 lncRNA upstream 129681 70164116 ~ 70165084 (-) False LOC110530448
TU842115 lncRNA upstream 136521 70170956 ~ 70172928 (-) True LOC110530448
XM_021613499.2 mRNA downstream 480517 69537168 ~ 69553690 (-) False LOC110530438
XM_036986068.1 mRNA downstream 480517 69537253 ~ 69553690 (-) True LOC110530438
XM_021613495.2 mRNA downstream 547073 69477306 ~ 69487134 (-) True LOC110530436
XM_036986849.1 mRNA downstream 559818 69461920 ~ 69474389 (-) True LOC118965618
XM_021613494.2 mRNA downstream 583784 69434542 ~ 69450423 (-) True si:ch73-40a17.3
XM_021613508.2 mRNA upstream 22068 70056503 ~ 70076393 (-) False LOC110530443
XM_021613509.2 mRNA upstream 22068 70056503 ~ 70076393 (-) False LOC110530443
XM_021613510.2 mRNA upstream 22068 70056503 ~ 70076393 (-) False LOC110530443
XM_021613511.2 mRNA upstream 22068 70056503 ~ 70076393 (-) False LOC110530443
XM_021613512.2 mRNA upstream 22068 70056503 ~ 70095132 (-) False LOC110530443
TU841504 other downstream 250913 69782289 ~ 69783294 (-) True G741177
TU841404 other downstream 306776 69725774 ~ 69727431 (-) True G741077
TU841403 other downstream 306828 69725774 ~ 69727379 (-) False G741077
TU841006 other downstream 603554 69408968 ~ 69430653 (-) False G740718
TU840819 other downstream 876481 69150343 ~ 69157726 (-) True igfbp1
TU842116 other upstream 117372 70151807 ~ 70160838 (-) True LOC110530971
TU842204 other upstream 164476 70198911 ~ 70200278 (-) True LOC110530449
TU842419 other upstream 484952 70519387 ~ 70525951 (-) False G742038
TU842800 other upstream 800923 70835358 ~ 70842457 (-) True G742383
TU843586 other upstream 1036199 71070634 ~ 71071082 (-) True G743076

Expression Profile