Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005669 |
| length | 3434 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | XLOC_001804 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 1966857 ~ 1991468 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0098916 | anterograde trans-synaptic signaling | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0099536 | synaptic signaling | biological_process |
| GO:0099537 | trans-synaptic signaling | biological_process |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:1905360 | GTPase complex | cellular_component |
| GO:0044306 | neuron projection terminus | cellular_component |
| GO:0098793 | presynapse | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005806 | lncRNA | upstream | 45837 | 1904355 ~ 1921020 (+) | True | XLOC_001803 |
| TCONS_00005668 | lncRNA | upstream | 253622 | 1698065 ~ 1713235 (+) | True | XLOC_001799 |
| TCONS_00005804 | lncRNA | upstream | 254087 | 1703905 ~ 1712770 (+) | False | XLOC_001800 |
| TCONS_00005805 | lncRNA | upstream | 254087 | 1708115 ~ 1712770 (+) | True | XLOC_001800 |
| TCONS_00005803 | lncRNA | upstream | 426125 | 1538299 ~ 1540732 (+) | True | XLOC_001794 |
| TCONS_00005807 | lncRNA | downstream | 411145 | 2402308 ~ 2404778 (+) | False | XLOC_001806 |
| TCONS_00005808 | lncRNA | downstream | 411145 | 2402308 ~ 2437908 (+) | True | XLOC_001806 |
| TCONS_00005809 | lncRNA | downstream | 508370 | 2499533 ~ 2504042 (+) | True | XLOC_001807 |
| TCONS_00005670 | lncRNA | downstream | 986372 | 2977535 ~ 2979504 (+) | True | XLOC_001823 |
| TCONS_00005810 | lncRNA | downstream | 1271415 | 3262578 ~ 3269818 (+) | True | XLOC_001827 |
| TCONS_00003602 | mRNA | upstream | 66195 | 1899595 ~ 1900662 (+) | True | XLOC_001802 |
| TCONS_00003601 | mRNA | upstream | 73762 | 1849874 ~ 1893095 (+) | True | XLOC_001801 |
| TCONS_00003600 | mRNA | upstream | 74711 | 1849874 ~ 1892146 (+) | False | XLOC_001801 |
| TCONS_00003599 | mRNA | upstream | 281975 | 1681518 ~ 1684882 (+) | True | XLOC_001798 |
| TCONS_00003598 | mRNA | upstream | 291495 | 1668106 ~ 1675362 (+) | True | XLOC_001796 |
| TCONS_00003606 | mRNA | downstream | 240860 | 2232023 ~ 2393791 (+) | False | XLOC_001805 |
| TCONS_00003607 | mRNA | downstream | 243120 | 2234283 ~ 2393791 (+) | True | XLOC_001805 |
| TCONS_00003608 | mRNA | downstream | 537874 | 2529037 ~ 2550378 (+) | True | XLOC_001808 |
| TCONS_00003609 | mRNA | downstream | 577630 | 2568793 ~ 2575387 (+) | False | XLOC_001809 |
| TCONS_00003610 | mRNA | downstream | 577754 | 2568917 ~ 2575387 (+) | True | XLOC_001809 |
| TCONS_00003597 | other | upstream | 301819 | 1664922 ~ 1665038 (+) | True | XLOC_001797 |
| TCONS_00003590 | other | upstream | 1161498 | 805244 ~ 805359 (+) | True | XLOC_001790 |
| TCONS_00003583 | other | upstream | 1459601 | 506563 ~ 507256 (+) | True | XLOC_001784 |
| TCONS_00003569 | other | upstream | 1754910 | 211782 ~ 211947 (+) | True | XLOC_001770 |
| TCONS_00003605 | other | downstream | 184420 | 2175583 ~ 2267357 (+) | False | XLOC_001805 |
| TCONS_00003616 | other | downstream | 697402 | 2688565 ~ 2688681 (+) | True | XLOC_001815 |
| TCONS_00003633 | other | downstream | 993881 | 2985044 ~ 3026523 (+) | True | XLOC_001822 |
| TCONS_00003646 | other | downstream | 1417620 | 3408783 ~ 3408900 (+) | True | XLOC_001830 |
| TCONS_00003658 | other | downstream | 2502114 | 4493277 ~ 4493358 (+) | True | XLOC_001842 |
