RNA id: TCONS_00035872


Basic Information

Item Value
RNA id TCONS_00035872
length 544
RNA type mRNA
GC content 0.49
exon number 4
gene id XLOC_018206
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 33555381 ~ 33556983 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTGGAGGAGTCAAACCGTACGCTGACTGTGGATGTTGCCAACCTGGCCAGTGAGAAAGAGGAGCTCAACAATAAACTGAAGCACATACAGCAAAaGCTGGAGAAGATCAAAGAAGAAGAGAAACAGATGAAATCTCTCACAGTGTCGTATGAGAAGCAGATACAGGTGGAGAAAACACTCAAGATTCAGGCTATAAACAAGCTGGCGGAGGTCATGAAGAAGACGGACGGCAGGCCACAGCAAATCAACAACACAGACATCCGCAGGAAGGAGAAGGAGATCAGGCAACTCCAGCTGCAGCTCCGCACGGAGAAAGAAAAGCTTAACCACTCCATCATCAAATACCAGAGAGAAATCAACGACATGCAGGCTATGATAGCAGAGGAGTCTCAGGTGCGTCTGGAGATGCAGATGTCTCTGGACAGTAAAGACAGTGATATTGAGCATCTGCGCAGTCAACTCACGTCTCTGAGCATTCACTCTCTGGACACCACCAGCATCAGCAGCATCGGCAATGACCTGGATTCTGACGAGGCTTATCCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000168798

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036885 lncRNA downstream 92013 33357974 ~ 33463368 (-) False XLOC_018201
TCONS_00035864 lncRNA downstream 92383 33461088 ~ 33462998 (-) True XLOC_018201
TCONS_00036884 lncRNA downstream 126503 33357974 ~ 33428878 (-) False XLOC_018201
TCONS_00036886 lncRNA downstream 126546 33427895 ~ 33428835 (-) False XLOC_018201
TCONS_00036883 lncRNA downstream 136368 33349174 ~ 33419013 (-) False XLOC_018201
TCONS_00036887 lncRNA upstream 151135 33708118 ~ 33711255 (-) True XLOC_018211
TCONS_00036888 lncRNA upstream 156557 33713540 ~ 33717068 (-) True XLOC_018212
TCONS_00036889 lncRNA upstream 164011 33720994 ~ 33721947 (-) False XLOC_018213
TCONS_00036890 lncRNA upstream 164011 33720994 ~ 33722205 (-) True XLOC_018213
TCONS_00036891 lncRNA upstream 168909 33725892 ~ 33728373 (-) True XLOC_018214
TCONS_00035871 mRNA downstream 39491 33513664 ~ 33515890 (-) True XLOC_018205
TCONS_00035868 mRNA downstream 42938 33499378 ~ 33512443 (-) False XLOC_018204
TCONS_00035869 mRNA downstream 43106 33499609 ~ 33512275 (-) False XLOC_018204
TCONS_00035870 mRNA downstream 47923 33503167 ~ 33507458 (-) True XLOC_018204
TCONS_00035867 mRNA downstream 58253 33493924 ~ 33497128 (-) True XLOC_018203
TCONS_00035873 mRNA upstream 7442 33564425 ~ 33566640 (-) True XLOC_018207
TCONS_00035874 mRNA upstream 14329 33571312 ~ 33583779 (-) True XLOC_018208
TCONS_00035875 mRNA upstream 44063 33601046 ~ 33705044 (-) False XLOC_018209
TCONS_00035877 mRNA upstream 92560 33649543 ~ 33704753 (-) False XLOC_018209
TCONS_00035880 mRNA upstream 112363 33669346 ~ 33675676 (-) True XLOC_018209
TCONS_00035866 other downstream 79896 33471221 ~ 33475485 (-) True XLOC_018202
TCONS_00035856 other downstream 905422 32649843 ~ 32649959 (-) True XLOC_018196
TCONS_00035855 other downstream 1094990 32460275 ~ 32460391 (-) True XLOC_018195
TCONS_00035840 other downstream 1544382 32010010 ~ 32010999 (-) False XLOC_018186
TCONS_00035824 other downstream 2510176 31045075 ~ 31045205 (-) True XLOC_018178
TCONS_00035876 other upstream 44430 33601413 ~ 33657569 (-) False XLOC_018209
TCONS_00035878 other upstream 99180 33656163 ~ 33686380 (-) False XLOC_018209
TCONS_00035879 other upstream 100351 33657334 ~ 33688599 (-) False XLOC_018209
TCONS_00035881 other upstream 144134 33701117 ~ 33701233 (-) True XLOC_018210
TCONS_00035885 other upstream 391659 33948642 ~ 33951690 (-) False XLOC_018218

Expression Profile

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