Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003605 |
| length | 821 |
| RNA type | processed_transcript |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_001805 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 2175583 ~ 2393791 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-091113-51 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including CNTNAP4 (contactin associated protein family member 4). |
| ensembl_id | ENSDART00000143636 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003604 | lncRNA | upstream | 184115 | 1982550 ~ 1991468 (+) | False | XLOC_001804 |
| TCONS_00003603 | lncRNA | upstream | 184115 | 1982550 ~ 1991468 (+) | True | XLOC_001804 |
| TCONS_00005669 | lncRNA | upstream | 184420 | 1966857 ~ 1991163 (+) | False | XLOC_001804 |
| TCONS_00005806 | lncRNA | upstream | 254563 | 1904355 ~ 1921020 (+) | True | XLOC_001803 |
| TCONS_00005668 | lncRNA | upstream | 462348 | 1698065 ~ 1713235 (+) | True | XLOC_001799 |
| TCONS_00005807 | lncRNA | downstream | 134951 | 2402308 ~ 2404778 (+) | False | XLOC_001806 |
| TCONS_00005808 | lncRNA | downstream | 134951 | 2402308 ~ 2437908 (+) | True | XLOC_001806 |
| TCONS_00005809 | lncRNA | downstream | 232176 | 2499533 ~ 2504042 (+) | True | XLOC_001807 |
| TCONS_00005670 | lncRNA | downstream | 710178 | 2977535 ~ 2979504 (+) | True | XLOC_001823 |
| TCONS_00005810 | lncRNA | downstream | 995221 | 3262578 ~ 3269818 (+) | True | XLOC_001827 |
| TCONS_00003602 | mRNA | upstream | 274921 | 1899595 ~ 1900662 (+) | True | XLOC_001802 |
| TCONS_00003601 | mRNA | upstream | 282488 | 1849874 ~ 1893095 (+) | True | XLOC_001801 |
| TCONS_00003600 | mRNA | upstream | 283437 | 1849874 ~ 1892146 (+) | False | XLOC_001801 |
| TCONS_00003599 | mRNA | upstream | 490701 | 1681518 ~ 1684882 (+) | True | XLOC_001798 |
| TCONS_00003598 | mRNA | upstream | 500221 | 1668106 ~ 1675362 (+) | True | XLOC_001796 |
| TCONS_00003608 | mRNA | downstream | 261680 | 2529037 ~ 2550378 (+) | True | XLOC_001808 |
| TCONS_00003609 | mRNA | downstream | 301436 | 2568793 ~ 2575387 (+) | False | XLOC_001809 |
| TCONS_00003610 | mRNA | downstream | 301560 | 2568917 ~ 2575387 (+) | True | XLOC_001809 |
| TCONS_00003611 | mRNA | downstream | 314897 | 2582254 ~ 2585625 (+) | True | XLOC_001810 |
| TCONS_00003612 | mRNA | downstream | 319877 | 2587234 ~ 2595731 (+) | True | XLOC_001811 |
| TCONS_00003597 | other | upstream | 510545 | 1664922 ~ 1665038 (+) | True | XLOC_001797 |
| TCONS_00003590 | other | upstream | 1370224 | 805244 ~ 805359 (+) | True | XLOC_001790 |
| TCONS_00003583 | other | upstream | 1668327 | 506563 ~ 507256 (+) | True | XLOC_001784 |
| TCONS_00003569 | other | upstream | 1963636 | 211782 ~ 211947 (+) | True | XLOC_001770 |
| TCONS_00003616 | other | downstream | 421208 | 2688565 ~ 2688681 (+) | True | XLOC_001815 |
| TCONS_00003633 | other | downstream | 717687 | 2985044 ~ 3026523 (+) | True | XLOC_001822 |
| TCONS_00003646 | other | downstream | 1141426 | 3408783 ~ 3408900 (+) | True | XLOC_001830 |
| TCONS_00003658 | other | downstream | 2225920 | 4493277 ~ 4493358 (+) | True | XLOC_001842 |
| TCONS_00003668 | other | downstream | 2718693 | 4986050 ~ 4987483 (+) | True | XLOC_001850 |
