Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003618 |
| length | 642 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | XLOC_001816 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 2715548 ~ 2755378 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007507 | heart development | biological_process |
| GO:0030177 | positive regulation of Wnt signaling pathway | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0008016 | regulation of heart contraction | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| GO:0004703 | G protein-coupled receptor kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-091204-274 | Predicted to enable protein kinase activity. Acts upstream of or within heart development; positive regulation of Wnt signaling pathway; and regulation of heart contraction. Predicted to be active in cytoplasm. Is expressed in brain; cardiovascular system; and otic vesicle. |
| ensembl_id | ENSDART00000122847 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005809 | lncRNA | upstream | 238457 | 2499533 ~ 2504042 (+) | True | XLOC_001807 |
| TCONS_00005808 | lncRNA | upstream | 304591 | 2402308 ~ 2437908 (+) | True | XLOC_001806 |
| TCONS_00005807 | lncRNA | upstream | 337721 | 2402308 ~ 2404778 (+) | False | XLOC_001806 |
| TCONS_00003604 | lncRNA | upstream | 751031 | 1982550 ~ 1991468 (+) | False | XLOC_001804 |
| TCONS_00005670 | lncRNA | downstream | 226088 | 2977535 ~ 2979504 (+) | True | XLOC_001823 |
| TCONS_00005810 | lncRNA | downstream | 511131 | 3262578 ~ 3269818 (+) | True | XLOC_001827 |
| TCONS_00005671 | lncRNA | downstream | 548437 | 3299884 ~ 3312438 (+) | True | XLOC_001828 |
| TCONS_00005672 | lncRNA | downstream | 585408 | 3336855 ~ 3341616 (+) | True | XLOC_001829 |
| TCONS_00005811 | lncRNA | downstream | 1105620 | 3857067 ~ 3857885 (+) | True | XLOC_001834 |
| TCONS_00003615 | mRNA | upstream | 51124 | 2684958 ~ 2691375 (+) | True | XLOC_001814 |
| TCONS_00003614 | mRNA | upstream | 71204 | 2669405 ~ 2671295 (+) | True | XLOC_001813 |
| TCONS_00003613 | mRNA | upstream | 75291 | 2600830 ~ 2667208 (+) | True | XLOC_001812 |
| TCONS_00003612 | mRNA | upstream | 146768 | 2587234 ~ 2595731 (+) | True | XLOC_001811 |
| TCONS_00003611 | mRNA | upstream | 156874 | 2582254 ~ 2585625 (+) | True | XLOC_001810 |
| TCONS_00003619 | mRNA | downstream | 47838 | 2799285 ~ 2801857 (+) | True | XLOC_001817 |
| TCONS_00003620 | mRNA | downstream | 55689 | 2807136 ~ 2836641 (+) | False | XLOC_001818 |
| TCONS_00003621 | mRNA | downstream | 55729 | 2807176 ~ 2838190 (+) | True | XLOC_001818 |
| TCONS_00003622 | mRNA | downstream | 89758 | 2841205 ~ 2850936 (+) | False | XLOC_001819 |
| TCONS_00003623 | mRNA | downstream | 89821 | 2841268 ~ 2850936 (+) | False | XLOC_001819 |
| TCONS_00003616 | other | upstream | 53818 | 2688565 ~ 2688681 (+) | True | XLOC_001815 |
| TCONS_00003605 | other | upstream | 475142 | 2175583 ~ 2267357 (+) | False | XLOC_001805 |
| TCONS_00003597 | other | upstream | 1077461 | 1664922 ~ 1665038 (+) | True | XLOC_001797 |
| TCONS_00003590 | other | upstream | 1937140 | 805244 ~ 805359 (+) | True | XLOC_001790 |
| TCONS_00003583 | other | upstream | 2235243 | 506563 ~ 507256 (+) | True | XLOC_001784 |
| TCONS_00003633 | other | downstream | 233597 | 2985044 ~ 3026523 (+) | True | XLOC_001822 |
| TCONS_00003646 | other | downstream | 657336 | 3408783 ~ 3408900 (+) | True | XLOC_001830 |
| TCONS_00003658 | other | downstream | 1741830 | 4493277 ~ 4493358 (+) | True | XLOC_001842 |
| TCONS_00003668 | other | downstream | 2234603 | 4986050 ~ 4987483 (+) | True | XLOC_001850 |
| TCONS_00003675 | other | downstream | 2384395 | 5135842 ~ 5147582 (+) | True | XLOC_001854 |
