RNA id: TCONS_00036008


Basic Information

Item Value
RNA id TCONS_00036008
length 116
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_018289
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 39032821 ~ 39032936 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCAGTgtatatcaccctgcagccccaagactggttactcactaaagctaagcagggctgagtctggtcagtacctggatgggagaccacatgggaaaatcaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176721

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036004 lncRNA downstream 236237 38795957 ~ 38796584 (-) True XLOC_018285
TCONS_00036002 lncRNA downstream 239278 38789928 ~ 38793543 (-) False XLOC_018285
TCONS_00036931 lncRNA downstream 361761 38664764 ~ 38671060 (-) True XLOC_018282
TCONS_00035990 lncRNA downstream 507496 38522660 ~ 38525325 (-) False XLOC_018280
TCONS_00036019 lncRNA upstream 308484 39341420 ~ 39344130 (-) False XLOC_018294
TCONS_00036020 lncRNA upstream 309724 39342660 ~ 39344123 (-) True XLOC_018294
TCONS_00036932 lncRNA upstream 342947 39375883 ~ 39502876 (-) False XLOC_018296
TCONS_00036490 lncRNA upstream 344765 39377701 ~ 39461357 (-) False XLOC_018296
TCONS_00036933 lncRNA upstream 350216 39383152 ~ 39432084 (-) False XLOC_018296
TCONS_00036006 mRNA downstream 115449 38892235 ~ 38917372 (-) True XLOC_018287
TCONS_00036005 mRNA downstream 196660 38831588 ~ 38836161 (-) True XLOC_018286
TCONS_00036001 mRNA downstream 205198 38788319 ~ 38827623 (-) False XLOC_018285
TCONS_00036003 mRNA downstream 230840 38791699 ~ 38801981 (-) False XLOC_018285
TCONS_00035999 mRNA downstream 245730 38765644 ~ 38787091 (-) False XLOC_018284
TCONS_00036009 mRNA upstream 22496 39055432 ~ 39103119 (-) False XLOC_018290
TCONS_00036010 mRNA upstream 23124 39056060 ~ 39188476 (-) True XLOC_018290
TCONS_00036011 mRNA upstream 157918 39190854 ~ 39219537 (-) True XLOC_018291
TCONS_00036012 mRNA upstream 227539 39260475 ~ 39265453 (-) False XLOC_018292
TCONS_00036013 mRNA upstream 227672 39260608 ~ 39273987 (-) False XLOC_018292
TCONS_00036007 other downstream 127208 38905531 ~ 38905613 (-) True XLOC_018288
TCONS_00035989 other downstream 510172 38518697 ~ 38522649 (-) False XLOC_018280
TCONS_00035984 other downstream 1098506 37930687 ~ 37934315 (-) True XLOC_018273
TCONS_00035936 other downstream 3487627 35541282 ~ 35545194 (-) True XLOC_018246
TCONS_00035933 other downstream 3521841 35510865 ~ 35510980 (-) True XLOC_018244
TCONS_00036068 other upstream 1729376 40762312 ~ 40766351 (-) False XLOC_018321
TCONS_00036069 other upstream 1729396 40762332 ~ 40766350 (-) False XLOC_018321
TCONS_00036070 other upstream 1729415 40762351 ~ 40766618 (-) True XLOC_018321
TCONS_00036071 other upstream 2195128 41228064 ~ 41228179 (-) True XLOC_018322
TCONS_00036072 other upstream 2319910 41352846 ~ 41352960 (-) True XLOC_018324