RNA id: TCONS_00036024


Basic Information

Item Value
RNA id TCONS_00036024
length 685
RNA type mRNA
GC content 0.43
exon number 8
gene id XLOC_018297
representative False

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 39389777 ~ 39391833 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGAAAAAATGAGAAACGTCTTCATGACATAAACAAGGAATTCAACAAAAACATTCACATGAATGACCCCAGCCAGGTTGTTTTAGaaAATCCGTTGTCCACAGAGAAGGTCATGGACTTGTCACTTGACCACTGACAGCACTGCCAGAAAATATTGTGGCTGCACAAATGACTGCTGCATCACCAGGCATATCATCTGTCACATCTCCTCAGTCATCagtaccaattacagaaaaatctGCTTGTGAACCTACTAAGCCTTGGGAGAGGGACTGGCATCCATTACAAGAAAAACTGctTGATTATGTGCTGGAGCGAAATCGGCCTGGCAGTGAAATATTTGTGAAGGAGGGGCAAGTGTGCCTTATTCGAGAAGAATTTTGGAGTCTTGTATTGCTAAGGGACATGGACTCCCATATTGGAAACGCCTGCATGAAGCTTATTTGTGAAATGGCTCGGCAAATTGGCAAGGACATATACATTGAGGACTTTTATGTTGTCCCTGTGTGGAAAACAACTCCTAACAACATTGTTACTGGATTACCGGAAGATGCAGACTTGAAAGACCTGTTAGCCTTTCCAGCATGGACAAATGCAAATGGACCAGACCACTTCGTTGTCTGTGAAAATTGCTTACCAAGTTGATCATGGGACATGGACTGAAAAGACTGGATATGATTTTCCAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-319 No description available

Ensembl:

ensembl_id ENSDART00000135149

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036019 lncRNA downstream 45647 39341420 ~ 39344130 (-) False XLOC_018294
TCONS_00036020 lncRNA downstream 45654 39342660 ~ 39344123 (-) True XLOC_018294
TCONS_00036004 lncRNA downstream 593193 38795957 ~ 38796584 (-) True XLOC_018285
TCONS_00036002 lncRNA downstream 596234 38789928 ~ 38793543 (-) False XLOC_018285
TCONS_00036931 lncRNA downstream 718717 38664764 ~ 38671060 (-) True XLOC_018282
TCONS_00036934 lncRNA upstream 6147 39397980 ~ 39431735 (-) False XLOC_018296
TCONS_00036935 lncRNA upstream 12376 39404209 ~ 39404969 (-) True XLOC_018298
TCONS_00036027 lncRNA upstream 19011 39410844 ~ 39413686 (-) False XLOC_018299
TCONS_00036026 lncRNA upstream 19011 39410844 ~ 39414258 (-) True XLOC_018299
TCONS_00036028 lncRNA upstream 27250 39419083 ~ 39453973 (-) False XLOC_018296
TCONS_00036022 mRNA downstream 21698 39359730 ~ 39368079 (-) False XLOC_018295
TCONS_00036021 mRNA downstream 21771 39359729 ~ 39368006 (-) False XLOC_018295
TCONS_00036023 mRNA downstream 21882 39363148 ~ 39367895 (-) True XLOC_018295
TCONS_00036018 mRNA downstream 45661 39338700 ~ 39344116 (-) False XLOC_018294
TCONS_00036016 mRNA downstream 55978 39332579 ~ 39333799 (-) False XLOC_018293
TCONS_00036031 mRNA upstream 121602 39513435 ~ 39517164 (-) True XLOC_018300
TCONS_00036032 mRNA upstream 128795 39520628 ~ 39582286 (-) False XLOC_018301
TCONS_00036033 mRNA upstream 184478 39576311 ~ 39582316 (-) True XLOC_018301
TCONS_00036034 mRNA upstream 197064 39588897 ~ 39596338 (-) True XLOC_018302
TCONS_00036039 mRNA upstream 299960 39691793 ~ 39735987 (-) False XLOC_018304
TCONS_00036008 other downstream 356841 39032821 ~ 39032936 (-) True XLOC_018289
TCONS_00036007 other downstream 484164 38905531 ~ 38905613 (-) True XLOC_018288
TCONS_00035989 other downstream 867128 38518697 ~ 38522649 (-) False XLOC_018280
TCONS_00035984 other downstream 1455462 37930687 ~ 37934315 (-) True XLOC_018273
TCONS_00035936 other downstream 3844583 35541282 ~ 35545194 (-) True XLOC_018246
TCONS_00036068 other upstream 1370479 40762312 ~ 40766351 (-) False XLOC_018321
TCONS_00036069 other upstream 1370499 40762332 ~ 40766350 (-) False XLOC_018321
TCONS_00036070 other upstream 1370518 40762351 ~ 40766618 (-) True XLOC_018321
TCONS_00036071 other upstream 1836231 41228064 ~ 41228179 (-) True XLOC_018322
TCONS_00036072 other upstream 1961013 41352846 ~ 41352960 (-) True XLOC_018324

Expression Profile

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