RNA id: TCONS_00036093


Basic Information

Item Value
RNA id TCONS_00036093
length 115
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_018339
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 42967274 ~ 42967388 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccagcagctagctctctgcagctctcacatggtcgcccactgaagccaagcagggcttcGCCCGCTCAGTacctggattggagaccacatgggaaagctaggttgcttcTGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000189700

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036497 lncRNA downstream 114944 42849227 ~ 42852330 (-) True XLOC_018338
TCONS_00036496 lncRNA downstream 148161 42806763 ~ 42819113 (-) True XLOC_018337
TCONS_00036495 lncRNA downstream 165849 42793559 ~ 42801425 (-) True XLOC_018336
TCONS_00036494 lncRNA downstream 206610 42757575 ~ 42760664 (-) True XLOC_018335
TCONS_00036493 lncRNA downstream 527512 42431560 ~ 42439762 (-) True XLOC_018331
TCONS_00036097 lncRNA upstream 69128 43036516 ~ 43037072 (-) False XLOC_018341
TCONS_00036098 lncRNA upstream 71673 43039061 ~ 43041305 (-) True XLOC_018341
TCONS_00036102 lncRNA upstream 378494 43345882 ~ 43389320 (-) False XLOC_018343
TCONS_00036103 lncRNA upstream 385703 43353091 ~ 43387167 (-) True XLOC_018343
TCONS_00036951 lncRNA upstream 430335 43397723 ~ 43410305 (-) False XLOC_018344
TCONS_00036092 mRNA downstream 217003 42748295 ~ 42750271 (-) True XLOC_018334
TCONS_00036090 mRNA downstream 264390 42688488 ~ 42702884 (-) False XLOC_018333
TCONS_00036091 mRNA downstream 264442 42701112 ~ 42702832 (-) True XLOC_018333
TCONS_00036088 mRNA downstream 432770 42506612 ~ 42534504 (-) False XLOC_018332
TCONS_00036089 mRNA downstream 433121 42506638 ~ 42534153 (-) True XLOC_018332
TCONS_00036094 mRNA upstream 1397 42968785 ~ 42972599 (-) True XLOC_018340
TCONS_00036095 mRNA upstream 49049 43016437 ~ 43079478 (-) False XLOC_018341
TCONS_00036100 mRNA upstream 152744 43120132 ~ 43346049 (-) False XLOC_018343
TCONS_00036101 mRNA upstream 155588 43122976 ~ 43353097 (-) False XLOC_018343
TCONS_00036106 mRNA upstream 464704 43432092 ~ 43436896 (-) True XLOC_018346
TCONS_00036086 other downstream 562062 42405098 ~ 42405212 (-) True XLOC_018330
TCONS_00036072 other downstream 1614314 41352846 ~ 41352960 (-) True XLOC_018324
TCONS_00036071 other downstream 1739095 41228064 ~ 41228179 (-) True XLOC_018322
TCONS_00036070 other downstream 2200656 40762351 ~ 40766618 (-) True XLOC_018321
TCONS_00036068 other downstream 2200923 40762312 ~ 40766351 (-) False XLOC_018321
TCONS_00036096 other upstream 49049 43016437 ~ 43079481 (-) False XLOC_018341
TCONS_00036099 other upstream 115561 43082949 ~ 43083067 (-) True XLOC_018342
TCONS_00036136 other upstream 1381554 44348942 ~ 44349057 (-) True XLOC_018363
TCONS_00036148 other upstream 1944825 44912213 ~ 44912331 (-) True XLOC_018369
TCONS_00036178 other upstream 3215799 46183187 ~ 46249185 (-) True XLOC_018394