RNA id: TCONS_00003646



Basic Information


Item Value
RNA id TCONS_00003646
length 118
RNA type rRNA
GC content 0.59
exon number 1
gene id XLOC_001830
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 3408783 ~ 3408900 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tttgccggcagctagctttctgcaactctcacaaggtcgcccactgaagctacgcagggctgcgcccggtcagtacctggatgggagactacatgggaaagccaagtgtgccgcaagc

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175555

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00005672 lncRNA upstream 67167 3336855 ~ 3341616 (+) True XLOC_001829
TCONS_00005671 lncRNA upstream 96345 3299884 ~ 3312438 (+) True XLOC_001828
TCONS_00005810 lncRNA upstream 138965 3262578 ~ 3269818 (+) True XLOC_001827
TCONS_00005670 lncRNA upstream 429279 2977535 ~ 2979504 (+) True XLOC_001823
TCONS_00005809 lncRNA upstream 904741 2499533 ~ 2504042 (+) True XLOC_001807
TCONS_00005811 lncRNA downstream 448167 3857067 ~ 3857885 (+) True XLOC_001834
TCONS_00005812 lncRNA downstream 880805 4289705 ~ 4299850 (+) True XLOC_001839
TCONS_00005813 lncRNA downstream 906063 4314963 ~ 4318863 (+) True XLOC_001840
TCONS_00005814 lncRNA downstream 926292 4335192 ~ 4341646 (+) True XLOC_001841
TCONS_00005673 lncRNA downstream 1400983 4809883 ~ 4810251 (+) True XLOC_001845
TCONS_00003645 mRNA upstream 49594 3336772 ~ 3359189 (+) False XLOC_001829
TCONS_00003644 mRNA upstream 86445 3299829 ~ 3322338 (+) False XLOC_001828
TCONS_00003642 mRNA upstream 252826 3145707 ~ 3155957 (+) False XLOC_001826
TCONS_00003643 mRNA upstream 253115 3153973 ~ 3155668 (+) True XLOC_001826
TCONS_00003640 mRNA upstream 278896 3111004 ~ 3129887 (+) False XLOC_001825
TCONS_00003647 mRNA downstream 19294 3428194 ~ 3452675 (+) False XLOC_001831
TCONS_00003648 mRNA downstream 21531 3430431 ~ 3455639 (+) True XLOC_001831
TCONS_00003649 mRNA downstream 98961 3507861 ~ 3510876 (+) True XLOC_001832
TCONS_00003650 mRNA downstream 111356 3520256 ~ 3532997 (+) True XLOC_001833
TCONS_00003652 mRNA downstream 466816 3875716 ~ 4039786 (+) False XLOC_001835
TCONS_00003633 other upstream 382260 2985044 ~ 3026523 (+) True XLOC_001822
TCONS_00003616 other upstream 720102 2688565 ~ 2688681 (+) True XLOC_001815
TCONS_00003605 other upstream 1141426 2175583 ~ 2267357 (+) False XLOC_001805
TCONS_00003597 other upstream 1743745 1664922 ~ 1665038 (+) True XLOC_001797
TCONS_00003590 other upstream 2603424 805244 ~ 805359 (+) True XLOC_001790
TCONS_00003658 other downstream 1084377 4493277 ~ 4493358 (+) True XLOC_001842
TCONS_00003668 other downstream 1577150 4986050 ~ 4987483 (+) True XLOC_001850
TCONS_00003675 other downstream 1726942 5135842 ~ 5147582 (+) True XLOC_001854
TCONS_00003679 other downstream 1742449 5151349 ~ 5152401 (+) True XLOC_001855
TCONS_00003693 other downstream 2336023 5744923 ~ 5769612 (+) False XLOC_001866