RNA id: TCONS_00036312


Basic Information

Item Value
RNA id TCONS_00036312
length 117
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_018493
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52827010 ~ 52827126 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agccACAGCCATATTGCCCTGCAGGCCAGgagcggttactcactgaagctgagcagggctgagcctggtcagtaactggatgggagactacatgggaaaaCAAGGTTGCTATTGCCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179180

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00037011 lncRNA downstream 7394 52818807 ~ 52819616 (-) True XLOC_018491
TCONS_00036517 lncRNA downstream 150543 52673108 ~ 52676467 (-) False XLOC_018488
TCONS_00036518 lncRNA downstream 150588 52674005 ~ 52676422 (-) False XLOC_018488
TCONS_00036519 lncRNA downstream 150600 52674085 ~ 52676410 (-) False XLOC_018488
TCONS_00036520 lncRNA downstream 150600 52674195 ~ 52676410 (-) True XLOC_018488
TCONS_00037012 lncRNA upstream 146734 52973860 ~ 52995339 (-) False XLOC_018498
TCONS_00036521 lncRNA upstream 146734 52973860 ~ 52995339 (-) True XLOC_018498
TCONS_00036522 lncRNA upstream 460747 53287873 ~ 53292515 (-) True XLOC_018501
TCONS_00036329 lncRNA upstream 595024 53422150 ~ 53435452 (-) True XLOC_018503
TCONS_00037013 lncRNA upstream 977236 53804362 ~ 53810646 (-) False XLOC_018505
TCONS_00036310 mRNA downstream 121685 52702012 ~ 52705325 (-) False XLOC_018490
TCONS_00036309 mRNA downstream 121685 52702012 ~ 52705325 (-) True XLOC_018490
TCONS_00036306 mRNA downstream 160860 52663031 ~ 52666150 (-) False XLOC_018487
TCONS_00036305 mRNA downstream 160860 52663031 ~ 52666150 (-) True XLOC_018487
TCONS_00036304 mRNA downstream 184506 52639377 ~ 52642504 (-) False XLOC_018485
TCONS_00036313 mRNA upstream 24667 52851793 ~ 52882881 (-) True XLOC_018494
TCONS_00036314 mRNA upstream 59801 52886927 ~ 52902693 (-) False XLOC_018495
TCONS_00036315 mRNA upstream 70974 52898100 ~ 52902720 (-) True XLOC_018495
TCONS_00036316 mRNA upstream 80271 52907397 ~ 52939501 (-) False XLOC_018496
TCONS_00036317 mRNA upstream 93768 52920894 ~ 52928541 (-) True XLOC_018496
TCONS_00036308 other downstream 136006 52686229 ~ 52691004 (-) False XLOC_018489
TCONS_00036307 other downstream 136006 52686229 ~ 52691004 (-) True XLOC_018489
TCONS_00036289 other downstream 682705 52144191 ~ 52144305 (-) True XLOC_018476
TCONS_00036283 other downstream 1077842 51748497 ~ 51749168 (-) True XLOC_018472
TCONS_00036281 other downstream 1099181 51700633 ~ 51727829 (-) False XLOC_018471
TCONS_00036326 other upstream 581158 53408284 ~ 53435476 (-) False XLOC_018503
TCONS_00036327 other upstream 581453 53408579 ~ 53435393 (-) False XLOC_018503
TCONS_00036338 other upstream 1169044 53996170 ~ 54012043 (-) True XLOC_018508
TCONS_00036341 other upstream 1186298 54013424 ~ 54034543 (-) True XLOC_018509