RNA id: TCONS_00036327


Basic Information

Item Value
RNA id TCONS_00036327
length 529
RNA type processed_transcript
GC content 0.59
exon number 5
gene id XLOC_018503
representative False

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 53408284 ~ 53435483 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CACACACATGGACAACAGAAGAGCAGGATCTACAGCGGATGACGGAGgttctGCGGTGGAGGATTGATCTGGAGCCGTGGGCCAATGGGATGCCTGCTTTACAGGAGGAGGCGCAGCGATTCCTCTCATACATCTCCACACCACAGgtgtcaTGTGACGCACACAGAGAGGATTATGGGCCATGGGCTCTGTGTTTGGACCAAAGGTTCAGTCTGGCTCAGCGGATCCGCTCTAAACACTGCCGTGTCTACTCACTCAGgctggGCTCGTCCTCAGCTGATGTTGTGGAGCGTGCTCTAGCCTCCTCCGGCTGTGACGTCCACTGTTTCGACCCCAGCATCAGCTCCGCTCacctgcagcagcagcagcacctgTGGCTGCATCGCCTCTCAGTGGACTGGAGAGACCCCAATCCTGCCGTCCCCCCACACAGAGCGCACAGCAACAGCAGGAAGCTCAAGAACATCCTCAACCACTTCGGCCACAGACAGGTGGACGTGCTGAAGGTGGACGTTGCGGGGGCAGAGTG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-138 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human METTL24 (methyltransferase like 24).

Ensembl:

ensembl_id ENSDART00000153173

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036522 lncRNA downstream 116064 53287873 ~ 53292515 (-) True XLOC_018501
TCONS_00037012 lncRNA downstream 413240 52973860 ~ 52995339 (-) False XLOC_018498
TCONS_00036521 lncRNA downstream 413240 52973860 ~ 52995339 (-) True XLOC_018498
TCONS_00037011 lncRNA downstream 588963 52818807 ~ 52819616 (-) True XLOC_018491
TCONS_00036520 lncRNA downstream 732169 52674195 ~ 52676410 (-) True XLOC_018488
TCONS_00037013 lncRNA upstream 368969 53804362 ~ 53810646 (-) False XLOC_018505
TCONS_00037014 lncRNA upstream 368969 53804362 ~ 53810669 (-) True XLOC_018505
TCONS_00036335 lncRNA upstream 538659 53974052 ~ 53975812 (-) True XLOC_018507
TCONS_00036523 lncRNA upstream 610785 54046178 ~ 54046733 (-) True XLOC_018510
TCONS_00037015 lncRNA upstream 615039 54050432 ~ 54051494 (-) True XLOC_018511
TCONS_00036325 mRNA downstream 42442 53306742 ~ 53366137 (-) True XLOC_018502
TCONS_00036324 mRNA downstream 87080 53300588 ~ 53321499 (-) False XLOC_018502
TCONS_00036323 mRNA downstream 87080 53300588 ~ 53321499 (-) False XLOC_018502
TCONS_00036322 mRNA downstream 87080 53300588 ~ 53321499 (-) False XLOC_018502
TCONS_00036321 mRNA downstream 231904 53169969 ~ 53176675 (-) True XLOC_018500
TCONS_00036330 mRNA upstream 165245 53600638 ~ 53624645 (-) False XLOC_018504
TCONS_00036331 mRNA upstream 171390 53606783 ~ 53624664 (-) True XLOC_018504
TCONS_00036332 mRNA upstream 462800 53898193 ~ 53963515 (-) False XLOC_018506
TCONS_00036333 mRNA upstream 477465 53912858 ~ 53949798 (-) True XLOC_018506
TCONS_00036334 mRNA upstream 531957 53967350 ~ 53981626 (-) False XLOC_018507
TCONS_00036312 other downstream 581453 52827010 ~ 52827126 (-) True XLOC_018493
TCONS_00036308 other downstream 717575 52686229 ~ 52691004 (-) False XLOC_018489
TCONS_00036307 other downstream 717575 52686229 ~ 52691004 (-) True XLOC_018489
TCONS_00036289 other downstream 1264274 52144191 ~ 52144305 (-) True XLOC_018476
TCONS_00036283 other downstream 1659411 51748497 ~ 51749168 (-) True XLOC_018472
TCONS_00036338 other upstream 560777 53996170 ~ 54012043 (-) True XLOC_018508
TCONS_00036341 other upstream 578031 54013424 ~ 54034543 (-) True XLOC_018509

Expression Profile

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