RNA id: TCONS_00003658



Basic Information


Item Value
RNA id TCONS_00003658
length 82
RNA type miRNA
GC content 0.49
exon number 1
gene id XLOC_001842
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 4493277 ~ 4493358 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTCACTATCGGTGCCCTCACAAAGGCACTGACTTGGATGCTGCATGTGGTAAGTGCTATTTGTTGGGGTAGTTTCAAGTGAC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000117940

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00005814 lncRNA upstream 151631 4335192 ~ 4341646 (+) True XLOC_001841
TCONS_00005813 lncRNA upstream 174414 4314963 ~ 4318863 (+) True XLOC_001840
TCONS_00005812 lncRNA upstream 193427 4289705 ~ 4299850 (+) True XLOC_001839
TCONS_00005811 lncRNA upstream 635392 3857067 ~ 3857885 (+) True XLOC_001834
TCONS_00005672 lncRNA upstream 1151661 3336855 ~ 3341616 (+) True XLOC_001829
TCONS_00005673 lncRNA downstream 316525 4809883 ~ 4810251 (+) True XLOC_001845
TCONS_00005815 lncRNA downstream 468457 4961815 ~ 4963300 (+) False XLOC_001848
TCONS_00003665 lncRNA downstream 469217 4962575 ~ 4963300 (+) True XLOC_001848
TCONS_00003667 lncRNA downstream 471152 4964510 ~ 4965110 (+) True XLOC_001849
TCONS_00005674 lncRNA downstream 494408 4987766 ~ 4992038 (+) False XLOC_001851
TCONS_00003657 mRNA upstream 234003 4235998 ~ 4259274 (+) True XLOC_001838
TCONS_00003656 mRNA upstream 380441 4095917 ~ 4112836 (+) True XLOC_001837
TCONS_00003655 mRNA upstream 408061 4046448 ~ 4085216 (+) True XLOC_001836
TCONS_00003654 mRNA upstream 413229 4046448 ~ 4080048 (+) False XLOC_001836
TCONS_00003652 mRNA upstream 453491 3875716 ~ 4039786 (+) False XLOC_001835
TCONS_00003659 mRNA downstream 6585 4499943 ~ 4508530 (+) True XLOC_001843
TCONS_00003660 mRNA downstream 312965 4806323 ~ 4808611 (+) False XLOC_001844
TCONS_00003661 mRNA downstream 314555 4807913 ~ 4831218 (+) True XLOC_001844
TCONS_00003662 mRNA downstream 381184 4874542 ~ 4911001 (+) False XLOC_001846
TCONS_00003663 mRNA downstream 381904 4875262 ~ 4911001 (+) True XLOC_001846
TCONS_00003646 other upstream 1084377 3408783 ~ 3408900 (+) True XLOC_001830
TCONS_00003633 other upstream 1466754 2985044 ~ 3026523 (+) True XLOC_001822
TCONS_00003616 other upstream 1804596 2688565 ~ 2688681 (+) True XLOC_001815
TCONS_00003605 other upstream 2225920 2175583 ~ 2267357 (+) False XLOC_001805
TCONS_00003597 other upstream 2828239 1664922 ~ 1665038 (+) True XLOC_001797
TCONS_00003668 other downstream 492692 4986050 ~ 4987483 (+) True XLOC_001850
TCONS_00003675 other downstream 642484 5135842 ~ 5147582 (+) True XLOC_001854
TCONS_00003679 other downstream 657991 5151349 ~ 5152401 (+) True XLOC_001855
TCONS_00003693 other downstream 1251565 5744923 ~ 5769612 (+) False XLOC_001866
TCONS_00003731 other downstream 2590413 7083771 ~ 7210108 (+) False XLOC_001887