Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003672 |
| length | 1377 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 14 |
| gene id | XLOC_001853 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 5060191 ~ 5090392 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0018216 | peptidyl-arginine methylation | biological_process |
| GO:0032259 | methylation | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0008168 | methyltransferase activity | molecular_function |
| GO:0016274 | protein-arginine N-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-090312-219 | Predicted to enable protein-arginine omega-N asymmetric methyltransferase activity. Predicted to act upstream of or within chromatin organization and peptidyl-arginine methylation. Predicted to be located in cytoplasm; membrane; and nucleus. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000122397 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005674 | lncRNA | upstream | 68223 | 4987766 ~ 4992038 (+) | False | XLOC_001851 |
| TCONS_00003667 | lncRNA | upstream | 95151 | 4964510 ~ 4965110 (+) | True | XLOC_001849 |
| TCONS_00005815 | lncRNA | upstream | 96961 | 4961815 ~ 4963300 (+) | False | XLOC_001848 |
| TCONS_00003665 | lncRNA | upstream | 96961 | 4962575 ~ 4963300 (+) | True | XLOC_001848 |
| TCONS_00005673 | lncRNA | upstream | 250010 | 4809883 ~ 4810251 (+) | True | XLOC_001845 |
| TCONS_00003677 | lncRNA | downstream | 58988 | 5149380 ~ 5152046 (+) | False | XLOC_001855 |
| TCONS_00003678 | lncRNA | downstream | 59077 | 5149469 ~ 5152401 (+) | False | XLOC_001855 |
| TCONS_00005675 | lncRNA | downstream | 141935 | 5232327 ~ 5234250 (+) | True | XLOC_001857 |
| TCONS_00005817 | lncRNA | downstream | 436798 | 5527190 ~ 5543141 (+) | False | XLOC_001863 |
| TCONS_00005816 | lncRNA | downstream | 436798 | 5527190 ~ 5543141 (+) | False | XLOC_001863 |
| TCONS_00003670 | mRNA | upstream | 22812 | 5025696 ~ 5037449 (+) | True | XLOC_001852 |
| TCONS_00003669 | mRNA | upstream | 64212 | 4987766 ~ 4996049 (+) | True | XLOC_001851 |
| TCONS_00003666 | mRNA | upstream | 91053 | 4964463 ~ 4969208 (+) | False | XLOC_001849 |
| TCONS_00003664 | mRNA | upstream | 125651 | 4924388 ~ 4934610 (+) | True | XLOC_001847 |
| TCONS_00003663 | mRNA | upstream | 149260 | 4875262 ~ 4911001 (+) | True | XLOC_001846 |
| TCONS_00003673 | mRNA | downstream | 45450 | 5135842 ~ 5144288 (+) | False | XLOC_001854 |
| TCONS_00003674 | mRNA | downstream | 45450 | 5135842 ~ 5147554 (+) | False | XLOC_001854 |
| TCONS_00003676 | mRNA | downstream | 58967 | 5149359 ~ 5156799 (+) | False | XLOC_001855 |
| TCONS_00003680 | mRNA | downstream | 69083 | 5159475 ~ 5221537 (+) | False | XLOC_001856 |
| TCONS_00003681 | mRNA | downstream | 113140 | 5203532 ~ 5221537 (+) | True | XLOC_001856 |
| TCONS_00003668 | other | upstream | 72778 | 4986050 ~ 4987483 (+) | True | XLOC_001850 |
| TCONS_00003658 | other | upstream | 566903 | 4493277 ~ 4493358 (+) | True | XLOC_001842 |
| TCONS_00003646 | other | upstream | 1651361 | 3408783 ~ 3408900 (+) | True | XLOC_001830 |
| TCONS_00003633 | other | upstream | 2033738 | 2985044 ~ 3026523 (+) | True | XLOC_001822 |
| TCONS_00003616 | other | upstream | 2371580 | 2688565 ~ 2688681 (+) | True | XLOC_001815 |
| TCONS_00003675 | other | downstream | 45450 | 5135842 ~ 5147582 (+) | True | XLOC_001854 |
| TCONS_00003679 | other | downstream | 60957 | 5151349 ~ 5152401 (+) | True | XLOC_001855 |
| TCONS_00003693 | other | downstream | 654531 | 5744923 ~ 5769612 (+) | False | XLOC_001866 |
| TCONS_00003731 | other | downstream | 1993379 | 7083771 ~ 7210108 (+) | False | XLOC_001887 |
| TCONS_00003739 | other | downstream | 2482924 | 7573316 ~ 7578051 (+) | True | XLOC_001890 |
