Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00003743 |
| length | 1266 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | XLOC_001892 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 7593185 ~ 7617748 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0004721 | phosphoprotein phosphatase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-2487 | Predicted to enable protein serine phosphatase activity and protein threonine phosphatase activity. Orthologous to human PPP2CB (protein phosphatase 2 catalytic subunit beta). |
| ensembl_id | ENSDART00000171744 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003730 | lncRNA | upstream | 490475 | 7083739 ~ 7102754 (+) | False | XLOC_001887 |
| TCONS_00005823 | lncRNA | upstream | 837463 | 6754270 ~ 6755766 (+) | True | XLOC_001884 |
| TCONS_00005822 | lncRNA | upstream | 908433 | 6684418 ~ 6684796 (+) | True | XLOC_001880 |
| TCONS_00005821 | lncRNA | upstream | 948454 | 6644397 ~ 6644775 (+) | True | XLOC_001878 |
| TCONS_00005820 | lncRNA | upstream | 964232 | 6628619 ~ 6628997 (+) | True | XLOC_001877 |
| TCONS_00005678 | lncRNA | downstream | 190972 | 7808711 ~ 7809243 (+) | True | XLOC_001897 |
| TCONS_00005824 | lncRNA | downstream | 225667 | 7843406 ~ 7849873 (+) | True | XLOC_001898 |
| TCONS_00005825 | lncRNA | downstream | 252870 | 7870609 ~ 7901888 (+) | True | XLOC_001899 |
| TCONS_00005826 | lncRNA | downstream | 360778 | 7978517 ~ 7984582 (+) | True | XLOC_001900 |
| TCONS_00005679 | lncRNA | downstream | 370286 | 7988025 ~ 7992459 (+) | True | XLOC_001901 |
| TCONS_00003740 | mRNA | upstream | 4351 | 7585928 ~ 7588878 (+) | True | XLOC_001891 |
| TCONS_00003737 | mRNA | upstream | 28155 | 7563755 ~ 7565074 (+) | False | XLOC_001889 |
| TCONS_00003738 | mRNA | upstream | 28158 | 7564106 ~ 7565071 (+) | True | XLOC_001889 |
| TCONS_00003735 | mRNA | upstream | 328463 | 7255695 ~ 7264766 (+) | False | XLOC_001888 |
| TCONS_00003744 | mRNA | downstream | 19072 | 7636811 ~ 7640797 (+) | True | XLOC_001893 |
| TCONS_00003745 | mRNA | downstream | 53521 | 7671260 ~ 7672949 (+) | True | XLOC_001894 |
| TCONS_00003746 | mRNA | downstream | 85512 | 7703251 ~ 7721903 (+) | False | XLOC_001895 |
| TCONS_00003747 | mRNA | downstream | 91985 | 7709724 ~ 7723457 (+) | False | XLOC_001895 |
| TCONS_00003748 | mRNA | downstream | 100417 | 7718156 ~ 7721764 (+) | False | XLOC_001895 |
| TCONS_00003739 | other | upstream | 15178 | 7573316 ~ 7578051 (+) | True | XLOC_001890 |
| TCONS_00003731 | other | upstream | 383121 | 7083771 ~ 7210108 (+) | False | XLOC_001887 |
| TCONS_00003693 | other | upstream | 1823617 | 5744923 ~ 5769612 (+) | False | XLOC_001866 |
| TCONS_00003679 | other | upstream | 2440828 | 5151349 ~ 5152401 (+) | True | XLOC_001855 |
| TCONS_00003675 | other | upstream | 2445647 | 5135842 ~ 5147582 (+) | True | XLOC_001854 |
| TCONS_00003759 | other | downstream | 725449 | 8343188 ~ 8343305 (+) | True | XLOC_001906 |
| TCONS_00003778 | other | downstream | 1244782 | 8862521 ~ 8868895 (+) | True | XLOC_001921 |
| TCONS_00003779 | other | downstream | 1251729 | 8869468 ~ 8880126 (+) | False | XLOC_001922 |
| TCONS_00003791 | other | downstream | 1728657 | 9346396 ~ 9348506 (+) | False | XLOC_001931 |
| TCONS_00003802 | other | downstream | 2108035 | 9725774 ~ 9725891 (+) | True | XLOC_001937 |
