RNA id: TCONS_00041274


Basic Information

Item Value
RNA id TCONS_00041274
length 724
RNA type mRNA
GC content 0.45
exon number 6
gene id XLOC_020987
representative False

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 13276693 ~ 13350356 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGAGGCGTTCAGCACATGGCCTTTTAGACTCCATCAAACTCAAGTGGACAGCAGTTGGAGAAACCAGGCGAGACAACCTGCTGAAACTCTCACAGTCAGACTGCCTACATGGAAGACATGGAATCAACCAGCCCACCAGTCTCACATAGACCAGCTAGCCAAATATACACAAGTGccgGTGAGATCACAAACGCCACGAAAGTAGACACAGTTGGTTTCAGTTCCATTGCTGACGAATCAGTGTACGGCATTCTGTTGGGAGTATCTCTGATAGCAGTGCTTGTGACGATTGTGCTCATTTCTGTAGTGGTTCTCCGCTACATTAGCCATCAGAAAGGTACATATTACACCTACGAGGAGTCTTTAGTGTTTAAGAGTGACCCCGAGATGCTGGACATGCCAGAAAGTCCAGATGACGAAGAGCTTTCAGAAGATCAAGATGATCAAGAAGATCCAGAAGATAAAGAAGACCCAGAAGAAGAGGAGCCTTAGTATCTCCTGGCTGGGAGCCTTTTGGGACGTTTCCTGTGTGAAATGTATCACTGTGAAAGACAGACGGATCTTTCGTGGATCCTCTTCCTTTTCACTCAACAATCGCATATGCCTTTTCCAGCAGATGTCCTTTTCTGATGGCTTCACACTCACGCAGTCcaaaactaaaatagatttcCATGTGAAGCACTTGTGTACTAGTTAATTTAACACAATACTAAGATGATGTTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000154095

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00041272 lncRNA downstream 37926 13218865 ~ 13244551 (-) True XLOC_020986
TCONS_00041943 lncRNA downstream 38246 13218865 ~ 13244231 (-) False XLOC_020986
TCONS_00042358 lncRNA downstream 38335 13201478 ~ 13244142 (-) False XLOC_020986
TCONS_00041271 lncRNA downstream 43806 13218865 ~ 13238671 (-) False XLOC_020986
TCONS_00042357 lncRNA downstream 94145 13187861 ~ 13188332 (-) True XLOC_020985
TCONS_00041276 lncRNA upstream 72328 13422568 ~ 13431304 (-) False XLOC_020988
TCONS_00041275 lncRNA upstream 72328 13422568 ~ 13431304 (-) True XLOC_020988
TCONS_00041944 lncRNA upstream 256041 13606281 ~ 13607563 (-) True XLOC_020990
TCONS_00042360 lncRNA upstream 288610 13638850 ~ 13649604 (-) True XLOC_020991
TCONS_00042361 lncRNA upstream 318745 13668985 ~ 13693627 (-) True XLOC_020992
TCONS_00041269 mRNA downstream 117291 13046270 ~ 13165186 (-) True XLOC_020983
TCONS_00041268 mRNA downstream 239485 12979213 ~ 13042992 (-) True XLOC_020982
TCONS_00041265 mRNA downstream 356736 12911236 ~ 12925741 (-) True XLOC_020978
TCONS_00041264 mRNA downstream 391556 12870275 ~ 12890921 (-) True XLOC_020977
TCONS_00041263 mRNA downstream 420062 12846949 ~ 12862415 (-) True XLOC_020976
TCONS_00041277 mRNA upstream 108495 13458735 ~ 13544244 (-) False XLOC_020989
TCONS_00041278 mRNA upstream 112744 13462984 ~ 13466246 (-) True XLOC_020989
TCONS_00041279 mRNA upstream 288346 13638586 ~ 13649588 (-) False XLOC_020991
TCONS_00041287 mRNA upstream 495890 13846130 ~ 13857729 (-) False XLOC_020994
TCONS_00041288 mRNA upstream 496896 13847136 ~ 13851297 (-) True XLOC_020994
TCONS_00041270 other downstream 170155 13101736 ~ 13112322 (-) True XLOC_020984
TCONS_00041266 other downstream 347888 12933485 ~ 12934589 (-) False XLOC_020979
TCONS_00041252 other downstream 656372 12617149 ~ 12626105 (-) False XLOC_020970
TCONS_00041253 other downstream 656398 12624266 ~ 12626079 (-) False XLOC_020970
TCONS_00041251 other downstream 671176 12607333 ~ 12611301 (-) False XLOC_020970
TCONS_00041280 other upstream 361194 13711434 ~ 13716397 (-) False XLOC_020993
TCONS_00041282 other upstream 361194 13711434 ~ 13716585 (-) False XLOC_020993
TCONS_00041281 other upstream 361194 13711434 ~ 13716585 (-) False XLOC_020993
TCONS_00041283 other upstream 362352 13712592 ~ 13716020 (-) False XLOC_020993
TCONS_00041284 other upstream 365136 13715376 ~ 13716067 (-) False XLOC_020993

Expression Profile

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