Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00044865 |
| length | 630 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | XLOC_021842 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 35402697 ~ 35498518 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007283 | spermatogenesis | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00043301 | lncRNA | upstream | 195500 | 35195740 ~ 35208386 (+) | True | XLOC_021841 |
| TCONS_00044861 | lncRNA | upstream | 416523 | 34849872 ~ 34987363 (+) | True | XLOC_021838 |
| TCONS_00043299 | lncRNA | upstream | 430745 | 34849715 ~ 34973141 (+) | False | XLOC_021838 |
| TCONS_00043304 | lncRNA | downstream | 9964 | 35426398 ~ 35466441 (+) | False | XLOC_021842 |
| TCONS_00044866 | lncRNA | downstream | 68460 | 35484894 ~ 35487575 (+) | True | XLOC_021843 |
| TCONS_00044867 | lncRNA | downstream | 71520 | 35487954 ~ 35498518 (+) | False | XLOC_021842 |
| TCONS_00044868 | lncRNA | downstream | 73084 | 35489518 ~ 35498165 (+) | True | XLOC_021842 |
| TCONS_00044678 | lncRNA | downstream | 140756 | 35557190 ~ 35560512 (+) | True | XLOC_021845 |
| TCONS_00043300 | mRNA | upstream | 378769 | 34990693 ~ 35025117 (+) | True | XLOC_021840 |
| TCONS_00043298 | mRNA | upstream | 650075 | 34321237 ~ 34753811 (+) | True | XLOC_021836 |
| TCONS_00043292 | mRNA | upstream | 1218867 | 34047413 ~ 34185019 (+) | False | XLOC_021835 |
| TCONS_00043306 | mRNA | downstream | 34616 | 35451050 ~ 35498276 (+) | False | XLOC_021842 |
| TCONS_00043307 | mRNA | downstream | 88390 | 35504824 ~ 35537727 (+) | False | XLOC_021844 |
| TCONS_00043308 | mRNA | downstream | 88401 | 35504835 ~ 35537363 (+) | True | XLOC_021844 |
| TCONS_00043309 | mRNA | downstream | 234337 | 35650771 ~ 35664505 (+) | False | XLOC_021846 |
| TCONS_00043311 | mRNA | downstream | 256108 | 35672542 ~ 35690336 (+) | False | XLOC_021847 |
| TCONS_00043297 | other | upstream | 1218872 | 34053506 ~ 34185014 (+) | True | XLOC_021835 |
| TCONS_00043296 | other | upstream | 1218877 | 34047563 ~ 34185009 (+) | False | XLOC_021835 |
| TCONS_00043293 | other | upstream | 1350177 | 34047416 ~ 34053709 (+) | False | XLOC_021835 |
| TCONS_00043288 | other | upstream | 1401013 | 34002757 ~ 34002873 (+) | True | XLOC_021833 |
| TCONS_00043276 | other | upstream | 1573696 | 33828665 ~ 33830190 (+) | True | XLOC_021826 |
| TCONS_00043305 | other | downstream | 10143 | 35426577 ~ 35469859 (+) | False | XLOC_021842 |
| TCONS_00043331 | other | downstream | 671657 | 36088091 ~ 36088196 (+) | True | XLOC_021861 |
| TCONS_00043339 | other | downstream | 713567 | 36130001 ~ 36130092 (+) | True | XLOC_021866 |
| TCONS_00043345 | other | downstream | 891227 | 36307661 ~ 36310418 (+) | False | XLOC_021870 |
| TCONS_00043352 | other | downstream | 1074680 | 36491114 ~ 36491234 (+) | True | XLOC_021877 |
