Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00044880 |
| length | 1815 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 7 |
| gene id | XLOC_021891 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 37227181 ~ 37433229 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0080090 | regulation of primary metabolic process | biological_process |
| GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0061009 | common bile duct development | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0005488 | binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0097159 | organic cyclic compound binding | molecular_function |
| GO:1901363 | heterocyclic compound binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044685 | lncRNA | upstream | 109104 | 37113287 ~ 37118114 (+) | True | XLOC_021889 |
| TCONS_00044877 | lncRNA | upstream | 188809 | 37026350 ~ 37038409 (+) | True | XLOC_021887 |
| TCONS_00043359 | lncRNA | upstream | 331849 | 36891729 ~ 36895369 (+) | True | XLOC_021886 |
| TCONS_00044876 | lncRNA | upstream | 381238 | 36842632 ~ 36845980 (+) | True | XLOC_021885 |
| TCONS_00044684 | lncRNA | upstream | 641467 | 36585179 ~ 36585751 (+) | True | XLOC_021878 |
| TCONS_00044687 | lncRNA | downstream | 31142 | 37464371 ~ 37464746 (+) | True | XLOC_021896 |
| TCONS_00044889 | lncRNA | downstream | 91661 | 37524890 ~ 37546006 (+) | True | XLOC_021900 |
| TCONS_00044890 | lncRNA | downstream | 145882 | 37579111 ~ 37582640 (+) | False | XLOC_021901 |
| TCONS_00044688 | lncRNA | downstream | 145886 | 37579115 ~ 37610542 (+) | True | XLOC_021901 |
| TCONS_00044891 | lncRNA | downstream | 227449 | 37660678 ~ 37661442 (+) | True | XLOC_021902 |
| TCONS_00043363 | mRNA | upstream | 28328 | 37185247 ~ 37198890 (+) | True | XLOC_021890 |
| TCONS_00043362 | mRNA | upstream | 133013 | 37090889 ~ 37094205 (+) | True | XLOC_021888 |
| TCONS_00043360 | mRNA | upstream | 137037 | 37086159 ~ 37090181 (+) | False | XLOC_021888 |
| TCONS_00043357 | mRNA | upstream | 428598 | 36771593 ~ 36798620 (+) | True | XLOC_021883 |
| TCONS_00043356 | mRNA | upstream | 476917 | 36730713 ~ 36750301 (+) | True | XLOC_021882 |
| TCONS_00043369 | mRNA | downstream | 11704 | 37444933 ~ 37453984 (+) | True | XLOC_021895 |
| TCONS_00043370 | mRNA | downstream | 25373 | 37458602 ~ 37466323 (+) | False | XLOC_021896 |
| TCONS_00043371 | mRNA | downstream | 33738 | 37466967 ~ 37480785 (+) | True | XLOC_021897 |
| TCONS_00043372 | mRNA | downstream | 49498 | 37482727 ~ 37490249 (+) | True | XLOC_021898 |
| TCONS_00043374 | mRNA | downstream | 145878 | 37579107 ~ 37720166 (+) | False | XLOC_021901 |
| TCONS_00043361 | other | upstream | 134095 | 37086165 ~ 37093123 (+) | False | XLOC_021888 |
| TCONS_00043358 | other | upstream | 436886 | 36790223 ~ 36790332 (+) | True | XLOC_021884 |
| TCONS_00043352 | other | upstream | 735984 | 36491114 ~ 36491234 (+) | True | XLOC_021877 |
| TCONS_00043345 | other | upstream | 916800 | 36307661 ~ 36310418 (+) | False | XLOC_021870 |
| TCONS_00043339 | other | upstream | 1097126 | 36130001 ~ 36130092 (+) | True | XLOC_021866 |
| TCONS_00043368 | other | downstream | 5605 | 37438834 ~ 37438950 (+) | True | XLOC_021894 |
| TCONS_00043373 | other | downstream | 59506 | 37492735 ~ 37492851 (+) | True | XLOC_021899 |
| TCONS_00043375 | other | downstream | 305634 | 37738863 ~ 37798412 (+) | False | XLOC_021904 |
| TCONS_00043376 | other | downstream | 317105 | 37750334 ~ 37768156 (+) | True | XLOC_021904 |
| TCONS_00043378 | other | downstream | 418601 | 37851830 ~ 37854622 (+) | True | XLOC_021906 |
