RNA id: TCONS_00044432


Basic Information

Item Value
RNA id TCONS_00044432
length 128
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_022530
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 35864726 ~ 35864853 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TATTGGGGAAATAACAACATtttagctctctgcaactttcacatggtcgcccactgaagctaagcaggcctgtgcctggtcagtacctagatgggagaccacatgggaaagctaggttgctgccaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118642

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045066 lncRNA downstream 195505 35663852 ~ 35669221 (-) True XLOC_022525
TCONS_00045065 lncRNA downstream 199144 35663852 ~ 35665582 (-) False XLOC_022525
TCONS_00045064 lncRNA downstream 315064 35540360 ~ 35549662 (-) False XLOC_022523
TCONS_00044416 lncRNA downstream 467966 35393107 ~ 35396760 (-) True XLOC_022520
TCONS_00045063 lncRNA downstream 661642 35200692 ~ 35203084 (-) True XLOC_022518
TCONS_00044436 lncRNA upstream 155943 36020796 ~ 36051826 (-) True XLOC_022532
TCONS_00044437 lncRNA upstream 216572 36081425 ~ 36088234 (-) True XLOC_022533
TCONS_00044438 lncRNA upstream 227493 36092346 ~ 36095368 (-) True XLOC_022534
TCONS_00044440 lncRNA upstream 245361 36110214 ~ 36228277 (-) False XLOC_022535
TCONS_00044439 lncRNA upstream 245361 36110214 ~ 36249991 (-) False XLOC_022535
TCONS_00044431 mRNA downstream 43205 35795759 ~ 35821521 (-) True XLOC_022529
TCONS_00044430 mRNA downstream 54725 35795759 ~ 35810001 (-) False XLOC_022529
TCONS_00044427 mRNA downstream 74466 35786942 ~ 35790260 (-) False XLOC_022528
TCONS_00044428 mRNA downstream 74470 35789040 ~ 35790256 (-) False XLOC_022528
TCONS_00044429 mRNA downstream 74491 35789183 ~ 35790235 (-) True XLOC_022528
TCONS_00044433 mRNA upstream 116986 35981839 ~ 36003282 (-) False XLOC_022531
TCONS_00044434 mRNA upstream 118195 35983048 ~ 36003441 (-) False XLOC_022531
TCONS_00044447 mRNA upstream 432368 36297221 ~ 36306356 (-) False XLOC_022536
TCONS_00044448 mRNA upstream 433306 36298159 ~ 36306006 (-) False XLOC_022536
TCONS_00044449 mRNA upstream 434165 36299018 ~ 36306337 (-) False XLOC_022536
TCONS_00044409 other downstream 608281 35244378 ~ 35256445 (-) False XLOC_022519
TCONS_00044402 other downstream 1878361 33978425 ~ 33986365 (-) True XLOC_022514
TCONS_00044400 other downstream 1895738 33968866 ~ 33968988 (-) True XLOC_022513
TCONS_00044391 other downstream 2119955 33739477 ~ 33744771 (-) False XLOC_022510
TCONS_00044369 other downstream 2563307 33301304 ~ 33301419 (-) True XLOC_022500
TCONS_00044435 other upstream 133694 35998547 ~ 35999332 (-) True XLOC_022531
TCONS_00044457 other upstream 457157 36322010 ~ 36322124 (-) True XLOC_022538
TCONS_00044460 other upstream 548845 36413698 ~ 36418022 (-) False XLOC_022539
TCONS_00044467 other upstream 645144 36509997 ~ 36510119 (-) True XLOC_022543
TCONS_00044471 other upstream 853522 36718375 ~ 36718495 (-) True XLOC_022548