RNA id: TCONS_00044457


Basic Information

Item Value
RNA id TCONS_00044457
length 115
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_022538
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36322010 ~ 36322124 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccagcagctagctctctgcaactctcacatggtctcccactgaagctaagtaggGATTCGTCAGGtaagtacctgaatgggagaccacatgggaaagctagattgctgccgggg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000185078

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045077 lncRNA downstream 43414 36110214 ~ 36278596 (-) False XLOC_022535
TCONS_00044444 lncRNA downstream 43414 36110214 ~ 36278596 (-) True XLOC_022535
TCONS_00044445 lncRNA downstream 44807 36110214 ~ 36277203 (-) False XLOC_022535
TCONS_00045075 lncRNA downstream 44843 36110214 ~ 36277167 (-) False XLOC_022535
TCONS_00045076 lncRNA downstream 44843 36110214 ~ 36277167 (-) False XLOC_022535
TCONS_00044461 lncRNA upstream 91574 36413698 ~ 36418063 (-) False XLOC_022539
TCONS_00044746 lncRNA upstream 96028 36418152 ~ 36420157 (-) False XLOC_022539
TCONS_00044747 lncRNA upstream 96045 36418169 ~ 36420154 (-) True XLOC_022539
TCONS_00045078 lncRNA upstream 283620 36605744 ~ 36606760 (-) False XLOC_022544
TCONS_00045079 lncRNA upstream 283620 36605744 ~ 36608323 (-) False XLOC_022544
TCONS_00044455 mRNA downstream 5658 36311581 ~ 36316352 (-) False XLOC_022537
TCONS_00044456 mRNA downstream 8579 36311593 ~ 36313431 (-) True XLOC_022537
TCONS_00044447 mRNA downstream 15654 36297221 ~ 36306356 (-) False XLOC_022536
TCONS_00044453 mRNA downstream 15669 36301201 ~ 36306341 (-) False XLOC_022536
TCONS_00044449 mRNA downstream 15673 36299018 ~ 36306337 (-) False XLOC_022536
TCONS_00044458 mRNA upstream 79448 36401572 ~ 36418708 (-) False XLOC_022539
TCONS_00044459 mRNA upstream 82810 36404934 ~ 36418059 (-) False XLOC_022539
TCONS_00044462 mRNA upstream 102644 36424768 ~ 36441693 (-) False XLOC_022540
TCONS_00044463 mRNA upstream 102989 36425113 ~ 36439961 (-) True XLOC_022540
TCONS_00044464 mRNA upstream 120898 36443022 ~ 36446307 (-) False XLOC_022541
TCONS_00044435 other downstream 322678 35998547 ~ 35999332 (-) True XLOC_022531
TCONS_00044432 other downstream 457157 35864726 ~ 35864853 (-) True XLOC_022530
TCONS_00044409 other downstream 1065565 35244378 ~ 35256445 (-) False XLOC_022519
TCONS_00044402 other downstream 2335645 33978425 ~ 33986365 (-) True XLOC_022514
TCONS_00044400 other downstream 2353022 33968866 ~ 33968988 (-) True XLOC_022513
TCONS_00044460 other upstream 91574 36413698 ~ 36418022 (-) False XLOC_022539
TCONS_00044467 other upstream 187873 36509997 ~ 36510119 (-) True XLOC_022543
TCONS_00044471 other upstream 396251 36718375 ~ 36718495 (-) True XLOC_022548
TCONS_00044475 other upstream 506348 36828472 ~ 36828588 (-) True XLOC_022550
TCONS_00044482 other upstream 637667 36959791 ~ 36959912 (-) True XLOC_022554