RNA id: TCONS_00044470


Basic Information

Item Value
RNA id TCONS_00044470
length 246
RNA type mRNA
GC content 0.30
exon number 9
gene id XLOC_022547
representative False

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36711024 ~ 36754685 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATATTGGGCGGGGTTATCAGTGTTTTAGtttttcttcttctcataAATATAGTAGATATTATAGCCAGTGAATAtcattatttcaaaatgttatatttttatacagtgagACTTcaaataattttcttatttaaaggtGGACTCTTTTGTAGTTGCATCGTGTACAGACAAGGACAGACAGaaaaacaaatggaatcatcatggcaaagatattttcaagacacttctatacagcttaaaaaaaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181104

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045080 lncRNA downstream 102241 36605744 ~ 36608783 (-) True XLOC_022544
TCONS_00045079 lncRNA downstream 102701 36605744 ~ 36608323 (-) False XLOC_022544
TCONS_00045078 lncRNA downstream 104264 36605744 ~ 36606760 (-) False XLOC_022544
TCONS_00044746 lncRNA downstream 290867 36418152 ~ 36420157 (-) False XLOC_022539
TCONS_00045082 lncRNA upstream 507 36753702 ~ 36754274 (-) True XLOC_022547
TCONS_00045083 lncRNA upstream 114850 36868045 ~ 36869244 (-) True XLOC_022551
TCONS_00044748 lncRNA upstream 244009 36997204 ~ 37000484 (-) True XLOC_022555
TCONS_00044492 lncRNA upstream 537820 37291015 ~ 37291816 (-) True XLOC_022559
TCONS_00044749 lncRNA upstream 770342 37523537 ~ 37525054 (-) True XLOC_022562
TCONS_00044468 mRNA downstream 40655 36660750 ~ 36670369 (-) True XLOC_022545
TCONS_00044466 mRNA downstream 118588 36497518 ~ 36592436 (-) True XLOC_022542
TCONS_00044465 mRNA downstream 261913 36443022 ~ 36449111 (-) True XLOC_022541
TCONS_00044464 mRNA downstream 264717 36443022 ~ 36446307 (-) False XLOC_022541
TCONS_00044463 mRNA downstream 271063 36425113 ~ 36439961 (-) True XLOC_022540
TCONS_00044472 mRNA upstream 63291 36816486 ~ 36857964 (-) False XLOC_022549
TCONS_00044473 mRNA upstream 63291 36816486 ~ 36857966 (-) False XLOC_022549
TCONS_00044474 mRNA upstream 69178 36822373 ~ 36823932 (-) False XLOC_022549
TCONS_00044476 mRNA upstream 89200 36842395 ~ 36857964 (-) True XLOC_022549
TCONS_00044477 mRNA upstream 117159 36870354 ~ 36884290 (-) False XLOC_022552
TCONS_00044467 other downstream 200905 36509997 ~ 36510119 (-) True XLOC_022543
TCONS_00044460 other downstream 293002 36413698 ~ 36418022 (-) False XLOC_022539
TCONS_00044457 other downstream 388900 36322010 ~ 36322124 (-) True XLOC_022538
TCONS_00044435 other downstream 711692 35998547 ~ 35999332 (-) True XLOC_022531
TCONS_00044432 other downstream 846171 35864726 ~ 35864853 (-) True XLOC_022530
TCONS_00044475 other upstream 75277 36828472 ~ 36828588 (-) True XLOC_022550
TCONS_00044482 other upstream 206596 36959791 ~ 36959912 (-) True XLOC_022554
TCONS_00044489 other upstream 523878 37277073 ~ 37280713 (-) True XLOC_022558
TCONS_00044499 other upstream 1343625 38096820 ~ 38099972 (-) True XLOC_022568
TCONS_00044500 other upstream 1374257 38127452 ~ 38127569 (-) True XLOC_022569