Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00044501 |
| length | 915 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 4 |
| gene id | XLOC_022570 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 38151393 ~ 38160024 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006457 | protein folding | biological_process |
| GO:0016272 | prefoldin complex | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| ko03110 | Chaperones and folding catalysts |
| id | description |
|---|---|
| ZDB-GENE-100922-122 | Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within protein folding. Predicted to be part of prefoldin complex. Predicted to be active in cytoplasm. Orthologous to human PFDN4 (prefoldin subunit 4). |
| ensembl_id | ENSDART00000087112 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00045088 | lncRNA | downstream | 426710 | 37722419 ~ 37724683 (-) | True | XLOC_022566 |
| TCONS_00045084 | lncRNA | downstream | 426828 | 37721384 ~ 37724565 (-) | False | XLOC_022566 |
| TCONS_00045089 | lncRNA | upstream | 297572 | 38457596 ~ 38497566 (-) | False | XLOC_022572 |
| TCONS_00044750 | lncRNA | upstream | 313110 | 38473134 ~ 38647152 (-) | False | XLOC_022573 |
| TCONS_00045090 | lncRNA | upstream | 327391 | 38487415 ~ 38497756 (-) | False | XLOC_022572 |
| TCONS_00045091 | lncRNA | upstream | 334579 | 38494603 ~ 38497628 (-) | True | XLOC_022572 |
| TCONS_00045093 | lncRNA | upstream | 348451 | 38508475 ~ 38634582 (-) | False | XLOC_022573 |
| TCONS_00044498 | mRNA | downstream | 315599 | 37823560 ~ 37835794 (-) | True | XLOC_022567 |
| TCONS_00044497 | mRNA | downstream | 576363 | 37566097 ~ 37575030 (-) | True | XLOC_022565 |
| TCONS_00044496 | mRNA | downstream | 604697 | 37539068 ~ 37546696 (-) | True | XLOC_022564 |
| TCONS_00044495 | mRNA | downstream | 615266 | 37530718 ~ 37536127 (-) | True | XLOC_022563 |
| TCONS_00044494 | mRNA | downstream | 636900 | 37493532 ~ 37514493 (-) | True | XLOC_022561 |
| TCONS_00044503 | mRNA | upstream | 169496 | 38329520 ~ 38330746 (-) | True | XLOC_022571 |
| TCONS_00044504 | mRNA | upstream | 219603 | 38379627 ~ 38497705 (-) | False | XLOC_022572 |
| TCONS_00044505 | mRNA | upstream | 1472373 | 39632397 ~ 39666658 (-) | False | XLOC_022580 |
| TCONS_00044506 | mRNA | upstream | 1472636 | 39632660 ~ 39636195 (-) | False | XLOC_022580 |
| TCONS_00044507 | mRNA | upstream | 1472938 | 39632962 ~ 39666519 (-) | False | XLOC_022580 |
| TCONS_00044500 | other | downstream | 23824 | 38127452 ~ 38127569 (-) | True | XLOC_022569 |
| TCONS_00044499 | other | downstream | 51421 | 38096820 ~ 38099972 (-) | True | XLOC_022568 |
| TCONS_00044489 | other | downstream | 870680 | 37277073 ~ 37280713 (-) | True | XLOC_022558 |
| TCONS_00044482 | other | downstream | 1191481 | 36959791 ~ 36959912 (-) | True | XLOC_022554 |
| TCONS_00044475 | other | downstream | 1322805 | 36828472 ~ 36828588 (-) | True | XLOC_022550 |
| TCONS_00044508 | other | upstream | 1481940 | 39641964 ~ 39666458 (-) | True | XLOC_022580 |
| TCONS_00044515 | other | upstream | 1784628 | 39944652 ~ 39945578 (-) | True | XLOC_022587 |
| TCONS_00044516 | other | upstream | 1791529 | 39951553 ~ 39952406 (-) | True | XLOC_022588 |
| TCONS_00044525 | other | upstream | 2368637 | 40528661 ~ 40536040 (-) | False | XLOC_022595 |
| TCONS_00044527 | other | upstream | 2432793 | 40592817 ~ 40592934 (-) | True | XLOC_022596 |
