RNA id: TCONS_00044503


Basic Information

Item Value
RNA id TCONS_00044503
length 1227
RNA type mRNA
GC content 0.44
exon number 1
gene id XLOC_022571
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 38329520 ~ 38330746 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aaagtgcccttccaaaatgatcaaaagtgcccccgtgaCGGGGCGCTACTGAGCAGGCGATGGAGTAAGGTAAAAGTTGGGTGAGCTCTGCAAAAAACGTAATATAACTTATAAATTTAAGGCGCTTTAATCGAAAATATGAGATGCTACATCTATCTAAGACTTTACTACTTCACATAAAGCAGCTGGGTTCTCTATAAATCCAAATGGCGGGCAAATTACGTAAATATAAGTACACGGGGAAAACCGCTGCTAATCAAGAGGATGCTAATACACCTAGCATGATGTCCGAGCCAGCCGAACACACTGACATTTTGGAGATTAAAGCTGAGCTGATCTCATCGATCAAAACGGAAATAACCTCGCTCTTTCAAAAAGAACTGAAAACTGCACTGTCAAACGAATTTGAAATGGTCAAAGCTGAATTACAAGCAGTTAAATCCGAGATAGCAAGCAACGCTTCGGCTGTTCGCTCAGATCTTGAGGCAATTAAAACGACAGTGTCAGACATGGAACGAGGCTTATCCAGCTGCTCAGACGATGTTACAGAACTGCAAAACACCGTGCGCAAACTGGAGAAAAATGTAGTAACCCTACAAGAGAAATGCTTGGACATGGAAGGGCGAATGAGGAGGTCAAACATTAGAATACTGAATGTAGCCGAAGATCCTGGCGCATGTACTCCAGCCTCAGTGTCGAAGCTGCTCAAAGACACCCTCAAAATGGATAAAGATATACTGATCGATAGATCTCATCGCACTCTCCAGGCAAAACGTGCAGATGGTAAACCCAGGGCCATTGTTGCAAAATTGCATTACTACCAGGACTGTGTGGAAATTCTACGCCGAGTTCGTGAAACCGGACCCCTTCATCATAACGGCGCAACCATATTCATCTTCCCCGACTACCCGCCGAGCGTGGCCCGTGCAAGATCGGCTTTTAACGAAGTCCGAAAACTACTACGAGGAAAAGATGGTGTTCGTTATGGCATTCTTCACCCGGCCAGGCTCCGAATCACACACAACGGGACGGAAAAGCAGTTCCAAGATGCAGCAGAAGCCCTGACTTATGTGAAAAATAATATTCTTTAAGACGGCTCGACCATCTCTGATTGAGTAGTACCAAGCCACTTCagtgactttgtttttttttcatacactCACACTCCCATCTAAATGACCATATTTGAGTGAGTATATGAACATTACATCTATGCAGAGACTGACT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192262

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045088 lncRNA downstream 604837 37722419 ~ 37724683 (-) True XLOC_022566
TCONS_00045084 lncRNA downstream 604955 37721384 ~ 37724565 (-) False XLOC_022566
TCONS_00045089 lncRNA upstream 126850 38457596 ~ 38497566 (-) False XLOC_022572
TCONS_00044750 lncRNA upstream 142388 38473134 ~ 38647152 (-) False XLOC_022573
TCONS_00045090 lncRNA upstream 156669 38487415 ~ 38497756 (-) False XLOC_022572
TCONS_00045091 lncRNA upstream 163857 38494603 ~ 38497628 (-) True XLOC_022572
TCONS_00045093 lncRNA upstream 177729 38508475 ~ 38634582 (-) False XLOC_022573
TCONS_00044501 mRNA downstream 169496 38151393 ~ 38160024 (-) False XLOC_022570
TCONS_00044498 mRNA downstream 493726 37823560 ~ 37835794 (-) True XLOC_022567
TCONS_00044497 mRNA downstream 754490 37566097 ~ 37575030 (-) True XLOC_022565
TCONS_00044496 mRNA downstream 782824 37539068 ~ 37546696 (-) True XLOC_022564
TCONS_00044495 mRNA downstream 793393 37530718 ~ 37536127 (-) True XLOC_022563
TCONS_00044504 mRNA upstream 48881 38379627 ~ 38497705 (-) False XLOC_022572
TCONS_00044505 mRNA upstream 1301651 39632397 ~ 39666658 (-) False XLOC_022580
TCONS_00044506 mRNA upstream 1301914 39632660 ~ 39636195 (-) False XLOC_022580
TCONS_00044507 mRNA upstream 1302216 39632962 ~ 39666519 (-) False XLOC_022580
TCONS_00044509 mRNA upstream 1400219 39730965 ~ 39738055 (-) True XLOC_022581
TCONS_00044502 other downstream 169776 38151415 ~ 38159744 (-) True XLOC_022570
TCONS_00044500 other downstream 201951 38127452 ~ 38127569 (-) True XLOC_022569
TCONS_00044499 other downstream 229548 38096820 ~ 38099972 (-) True XLOC_022568
TCONS_00044489 other downstream 1048807 37277073 ~ 37280713 (-) True XLOC_022558
TCONS_00044482 other downstream 1369608 36959791 ~ 36959912 (-) True XLOC_022554
TCONS_00044508 other upstream 1311218 39641964 ~ 39666458 (-) True XLOC_022580
TCONS_00044515 other upstream 1613906 39944652 ~ 39945578 (-) True XLOC_022587
TCONS_00044516 other upstream 1620807 39951553 ~ 39952406 (-) True XLOC_022588
TCONS_00044525 other upstream 2197915 40528661 ~ 40536040 (-) False XLOC_022595
TCONS_00044527 other upstream 2262071 40592817 ~ 40592934 (-) True XLOC_022596

Expression Profile

//