RNA id: TCONS_00044527


Basic Information

Item Value
RNA id TCONS_00044527
length 118
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_022596
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40592817 ~ 40592934 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ggctagtaatattgacctcaaaatcgATCACCaaggtcacccactgaagctaagcagggctgcgcccggtcagtaccaggatgggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000121199

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045118 lncRNA downstream 86704 40459952 ~ 40506113 (-) True XLOC_022594
TCONS_00044522 lncRNA downstream 86714 40459952 ~ 40506103 (-) False XLOC_022594
TCONS_00045117 lncRNA downstream 86726 40459952 ~ 40506091 (-) False XLOC_022594
TCONS_00045116 lncRNA downstream 112403 40459952 ~ 40480414 (-) False XLOC_022594
TCONS_00045115 lncRNA downstream 115918 40459952 ~ 40476899 (-) False XLOC_022594
TCONS_00045120 lncRNA upstream 403517 40996451 ~ 40999225 (-) False XLOC_022607
TCONS_00045119 lncRNA upstream 403517 40996451 ~ 40999225 (-) True XLOC_022607
TCONS_00045121 lncRNA upstream 710578 41303512 ~ 41305045 (-) True XLOC_022609
TCONS_00045122 lncRNA upstream 1019835 41612769 ~ 41618019 (-) True XLOC_022612
TCONS_00044755 lncRNA upstream 1064246 41657180 ~ 41659516 (-) True XLOC_022614
TCONS_00044523 mRNA downstream 56728 40525985 ~ 40536089 (-) False XLOC_022595
TCONS_00044526 mRNA downstream 56777 40529212 ~ 40536040 (-) True XLOC_022595
TCONS_00044524 mRNA downstream 56800 40526893 ~ 40536017 (-) False XLOC_022595
TCONS_00044521 mRNA downstream 297207 40257233 ~ 40295610 (-) False XLOC_022592
TCONS_00044520 mRNA downstream 341931 40234602 ~ 40250886 (-) True XLOC_022591
TCONS_00044528 mRNA upstream 162830 40755764 ~ 40766518 (-) True XLOC_022597
TCONS_00044529 mRNA upstream 179339 40772273 ~ 40773796 (-) False XLOC_022598
TCONS_00044530 mRNA upstream 179395 40772329 ~ 40788933 (-) False XLOC_022598
TCONS_00044531 mRNA upstream 182417 40775351 ~ 40776046 (-) True XLOC_022599
TCONS_00044532 mRNA upstream 183303 40776237 ~ 40779334 (-) True XLOC_022600
TCONS_00044525 other downstream 56777 40528661 ~ 40536040 (-) False XLOC_022595
TCONS_00044516 other downstream 640411 39951553 ~ 39952406 (-) True XLOC_022588
TCONS_00044515 other downstream 647239 39944652 ~ 39945578 (-) True XLOC_022587
TCONS_00044508 other downstream 926359 39641964 ~ 39666458 (-) True XLOC_022580
TCONS_00044502 other downstream 2433073 38151415 ~ 38159744 (-) True XLOC_022570
TCONS_00044540 other upstream 694399 41287333 ~ 41287449 (-) True XLOC_022608
TCONS_00044542 other upstream 752810 41345744 ~ 41345858 (-) True XLOC_022611
TCONS_00044546 other upstream 1161556 41754490 ~ 41762926 (-) True XLOC_022615
TCONS_00044552 other upstream 1810630 42403564 ~ 42403680 (-) True XLOC_022623
TCONS_00044554 other upstream 1915800 42508734 ~ 42515002 (-) True XLOC_022624