RNA id: TCONS_00044531


Basic Information

Item Value
RNA id TCONS_00044531
length 580
RNA type mRNA
GC content 0.47
exon number 2
gene id XLOC_022599
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 40775351 ~ 40776046 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCAGCACAGCCTGAGACAGATCCTGATTTGCTGAGTGTTTCAGAAGAAAGTGATTACGAATCAGCTTCTGAAATGGAAGAGGTCGACATGGAGCTATCATGTGTTCCAGAGCCAGAAACTGAATTGGATCTGGTTGATCCGGAAGGTGTACCAGTTCCAGGAAGTTTTGGGCAGGAACCTATGTATAGAGAAACTCTACATGTTGACCTCATCAAGCCTCATACCTCCTATGACTTGAAGAGCTCTGCGCTGGCTTCTGAACTTCTGCAGGACCCAGCAGAGCCTTCAACAGAAGAGGTGGAGAGCAGCAGTGGGATTGACCAGGGTGGCATGAATGCTTCTCCCGAAATCCCACTGGTGGACAGACCAACAGAAGTACCTGAAGTGTGGAAGATGTTTGCTGACTACCCAGAGATTTATAAGTTCTTGGCACAGCATCAGACAGACCCAGATGTTGCTCAGATAATAAGTGTTTCAGAGACAAGCGATTATGAATCAGCTTCTGAAATGGAAGAGGTCGACATGGAGCTATCATGTGTTCCTGATCCAGAAACTGAAATGGATCTGGTTGATCCGGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000136230

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045118 lncRNA downstream 269238 40459952 ~ 40506113 (-) True XLOC_022594
TCONS_00044522 lncRNA downstream 269248 40459952 ~ 40506103 (-) False XLOC_022594
TCONS_00045117 lncRNA downstream 269260 40459952 ~ 40506091 (-) False XLOC_022594
TCONS_00045116 lncRNA downstream 294937 40459952 ~ 40480414 (-) False XLOC_022594
TCONS_00045115 lncRNA downstream 298452 40459952 ~ 40476899 (-) False XLOC_022594
TCONS_00045120 lncRNA upstream 220405 40996451 ~ 40999225 (-) False XLOC_022607
TCONS_00045119 lncRNA upstream 220405 40996451 ~ 40999225 (-) True XLOC_022607
TCONS_00045121 lncRNA upstream 527466 41303512 ~ 41305045 (-) True XLOC_022609
TCONS_00045122 lncRNA upstream 836723 41612769 ~ 41618019 (-) True XLOC_022612
TCONS_00044755 lncRNA upstream 881134 41657180 ~ 41659516 (-) True XLOC_022614
TCONS_00044529 mRNA downstream 1555 40772273 ~ 40773796 (-) False XLOC_022598
TCONS_00044528 mRNA downstream 8833 40755764 ~ 40766518 (-) True XLOC_022597
TCONS_00044523 mRNA downstream 239262 40525985 ~ 40536089 (-) False XLOC_022595
TCONS_00044526 mRNA downstream 239311 40529212 ~ 40536040 (-) True XLOC_022595
TCONS_00044524 mRNA downstream 239334 40526893 ~ 40536017 (-) False XLOC_022595
TCONS_00044532 mRNA upstream 191 40776237 ~ 40779334 (-) True XLOC_022600
TCONS_00044533 mRNA upstream 12311 40788357 ~ 40790196 (-) True XLOC_022598
TCONS_00044534 mRNA upstream 15387 40791433 ~ 40792128 (-) True XLOC_022601
TCONS_00044535 mRNA upstream 16273 40792319 ~ 40796992 (-) True XLOC_022602
TCONS_00044536 mRNA upstream 34240 40810286 ~ 40812119 (-) True XLOC_022603
TCONS_00044527 other downstream 182417 40592817 ~ 40592934 (-) True XLOC_022596
TCONS_00044525 other downstream 239311 40528661 ~ 40536040 (-) False XLOC_022595
TCONS_00044516 other downstream 822945 39951553 ~ 39952406 (-) True XLOC_022588
TCONS_00044515 other downstream 829773 39944652 ~ 39945578 (-) True XLOC_022587
TCONS_00044508 other downstream 1108893 39641964 ~ 39666458 (-) True XLOC_022580
TCONS_00044540 other upstream 511287 41287333 ~ 41287449 (-) True XLOC_022608
TCONS_00044542 other upstream 569698 41345744 ~ 41345858 (-) True XLOC_022611
TCONS_00044546 other upstream 978444 41754490 ~ 41762926 (-) True XLOC_022615
TCONS_00044552 other upstream 1627518 42403564 ~ 42403680 (-) True XLOC_022623
TCONS_00044554 other upstream 1732688 42508734 ~ 42515002 (-) True XLOC_022624

Expression Profile

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