Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046245 |
| length | 1285 |
| RNA type | processed_transcript |
| GC content | 0.47 |
| exon number | 7 |
| gene id | XLOC_023387 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 18469766 ~ 18485491 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-141219-27 | Human ortholog(s) of this gene implicated in Leber congenital amaurosis 13 and Leber hereditary optic neuropathy. Orthologous to several human genes including RDH12 (retinol dehydrogenase 12). |
| ensembl_id | ENSDART00000172533 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00046243 | lncRNA | downstream | 3128 | 18460675 ~ 18467038 (-) | True | XLOC_023386 |
| TCONS_00046239 | lncRNA | downstream | 23562 | 18444191 ~ 18446604 (-) | False | XLOC_023385 |
| TCONS_00046240 | lncRNA | downstream | 23562 | 18445687 ~ 18446604 (-) | True | XLOC_023385 |
| TCONS_00046238 | lncRNA | downstream | 25087 | 18444191 ~ 18445079 (-) | False | XLOC_023385 |
| TCONS_00046852 | lncRNA | downstream | 447952 | 18021574 ~ 18022214 (-) | False | XLOC_023384 |
| TCONS_00046254 | lncRNA | upstream | 74762 | 18560253 ~ 18568486 (-) | False | XLOC_023389 |
| TCONS_00046267 | lncRNA | upstream | 1223044 | 19708535 ~ 19709047 (-) | False | XLOC_023394 |
| TCONS_00046853 | lncRNA | upstream | 1473425 | 19958916 ~ 19962882 (-) | False | XLOC_023395 |
| TCONS_00046854 | lncRNA | upstream | 1475381 | 19960872 ~ 19962882 (-) | True | XLOC_023395 |
| TCONS_00046271 | lncRNA | upstream | 1525091 | 20010582 ~ 20012032 (-) | True | XLOC_023396 |
| TCONS_00046241 | mRNA | downstream | 3102 | 18448108 ~ 18467064 (-) | False | XLOC_023386 |
| TCONS_00046237 | mRNA | downstream | 23562 | 18444189 ~ 18446604 (-) | False | XLOC_023385 |
| TCONS_00046235 | mRNA | downstream | 290631 | 17421722 ~ 18179535 (-) | True | XLOC_023382 |
| TCONS_00046231 | mRNA | downstream | 577781 | 17417150 ~ 17892385 (-) | False | XLOC_023382 |
| TCONS_00046248 | mRNA | upstream | 375 | 18485866 ~ 18510631 (-) | True | XLOC_023388 |
| TCONS_00046251 | mRNA | upstream | 34911 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046252 | mRNA | upstream | 34911 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046250 | mRNA | upstream | 34911 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046249 | mRNA | upstream | 34911 | 18520402 ~ 18685009 (-) | False | XLOC_023389 |
| TCONS_00046242 | other | downstream | 13582 | 18453172 ~ 18456584 (-) | False | XLOC_023386 |
| TCONS_00046236 | other | downstream | 923297 | 17546753 ~ 17546869 (-) | True | XLOC_023383 |
| TCONS_00046223 | other | downstream | 1331052 | 17136749 ~ 17139114 (-) | True | XLOC_023377 |
| TCONS_00046216 | other | downstream | 1490438 | 16971104 ~ 16979728 (-) | True | XLOC_023371 |
| TCONS_00046210 | other | downstream | 1570042 | 16896808 ~ 16900124 (-) | False | XLOC_023369 |
| TCONS_00046255 | other | upstream | 74939 | 18560430 ~ 18598641 (-) | True | XLOC_023389 |
| TCONS_00046256 | other | upstream | 139761 | 18625252 ~ 18625367 (-) | True | XLOC_023390 |
| TCONS_00046263 | other | upstream | 424526 | 18910017 ~ 18919557 (-) | True | XLOC_023392 |
| TCONS_00046264 | other | upstream | 803163 | 19288654 ~ 19288768 (-) | True | XLOC_023393 |
| TCONS_00046272 | other | upstream | 1546840 | 20032331 ~ 20054257 (-) | False | XLOC_023397 |
