Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046270 |
| length | 1321 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | XLOC_023396 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 20006711 ~ 20016817 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-061013-532 | Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; heart; pleuroperitoneal region; and skeletal muscle. Orthologous to several human genes including SLC22A13 (solute carrier family 22 member 13). |
| ensembl_id | ENSDART00000189448 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00046853 | lncRNA | downstream | 47170 | 19958916 ~ 19962882 (-) | False | XLOC_023395 |
| TCONS_00046854 | lncRNA | downstream | 47170 | 19960872 ~ 19962882 (-) | True | XLOC_023395 |
| TCONS_00046267 | lncRNA | downstream | 301005 | 19708535 ~ 19709047 (-) | False | XLOC_023394 |
| TCONS_00046254 | lncRNA | downstream | 1441566 | 18560253 ~ 18568486 (-) | False | XLOC_023389 |
| TCONS_00046243 | lncRNA | downstream | 1543014 | 18460675 ~ 18467038 (-) | True | XLOC_023386 |
| TCONS_00046275 | lncRNA | upstream | 43874 | 20060691 ~ 20062056 (-) | False | XLOC_023398 |
| TCONS_00046274 | lncRNA | upstream | 43874 | 20060691 ~ 20063050 (-) | True | XLOC_023398 |
| TCONS_00047174 | lncRNA | upstream | 165180 | 20181997 ~ 20185025 (-) | True | XLOC_023400 |
| TCONS_00047175 | lncRNA | upstream | 433210 | 20450027 ~ 20501301 (-) | False | XLOC_023407 |
| TCONS_00046288 | lncRNA | upstream | 433798 | 20450615 ~ 20470991 (-) | False | XLOC_023407 |
| TCONS_00046268 | mRNA | downstream | 290812 | 19708869 ~ 19719240 (-) | True | XLOC_023394 |
| TCONS_00046265 | mRNA | downstream | 291975 | 19707609 ~ 19718077 (-) | False | XLOC_023394 |
| TCONS_00046266 | mRNA | downstream | 291975 | 19707612 ~ 19718077 (-) | False | XLOC_023394 |
| TCONS_00046261 | mRNA | downstream | 1090481 | 18883629 ~ 18919571 (-) | False | XLOC_023392 |
| TCONS_00046276 | mRNA | upstream | 47271 | 20064088 ~ 20152965 (-) | True | XLOC_023399 |
| TCONS_00046278 | mRNA | upstream | 172097 | 20188914 ~ 20192996 (-) | True | XLOC_023402 |
| TCONS_00046279 | mRNA | upstream | 177205 | 20194022 ~ 20208474 (-) | True | XLOC_023403 |
| TCONS_00046280 | mRNA | upstream | 197601 | 20214418 ~ 20321012 (-) | False | XLOC_023404 |
| TCONS_00046281 | mRNA | upstream | 212423 | 20229240 ~ 20320480 (-) | True | XLOC_023404 |
| TCONS_00046264 | other | downstream | 721284 | 19288654 ~ 19288768 (-) | True | XLOC_023393 |
| TCONS_00046263 | other | downstream | 1090495 | 18910017 ~ 18919557 (-) | True | XLOC_023392 |
| TCONS_00046256 | other | downstream | 1384685 | 18625252 ~ 18625367 (-) | True | XLOC_023390 |
| TCONS_00046255 | other | downstream | 1411411 | 18560430 ~ 18598641 (-) | True | XLOC_023389 |
| TCONS_00046247 | other | downstream | 1524641 | 18473781 ~ 18485411 (-) | True | XLOC_023387 |
| TCONS_00046272 | other | upstream | 15514 | 20032331 ~ 20054257 (-) | False | XLOC_023397 |
| TCONS_00046273 | other | upstream | 15523 | 20032340 ~ 20039150 (-) | True | XLOC_023397 |
| TCONS_00046277 | other | upstream | 170499 | 20187316 ~ 20187430 (-) | True | XLOC_023401 |
| TCONS_00046286 | other | upstream | 433210 | 20450027 ~ 20531586 (-) | False | XLOC_023407 |
| TCONS_00046292 | other | upstream | 454137 | 20470954 ~ 20471090 (-) | True | XLOC_023407 |
