RNA id: TCONS_00046277


Basic Information

Item Value
RNA id TCONS_00046277
length 115
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_023401
representative True

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 20187316 ~ 20187430 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtcggcagctagctctctgcaactctcacatggtcacccactgaagctaaacagggctgcGCCCTGTCAgtagctggatgggagaccaagtgggaaagctgggttgttgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181537

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00047174 lncRNA downstream 2291 20181997 ~ 20185025 (-) True XLOC_023400
TCONS_00046274 lncRNA downstream 124266 20060691 ~ 20063050 (-) True XLOC_023398
TCONS_00046275 lncRNA downstream 125260 20060691 ~ 20062056 (-) False XLOC_023398
TCONS_00046271 lncRNA downstream 175284 20010582 ~ 20012032 (-) True XLOC_023396
TCONS_00046853 lncRNA downstream 224434 19958916 ~ 19962882 (-) False XLOC_023395
TCONS_00047175 lncRNA upstream 262597 20450027 ~ 20501301 (-) False XLOC_023407
TCONS_00046288 lncRNA upstream 263185 20450615 ~ 20470991 (-) False XLOC_023407
TCONS_00046290 lncRNA upstream 263408 20450838 ~ 20469290 (-) False XLOC_023407
TCONS_00046291 lncRNA upstream 283348 20470778 ~ 20501301 (-) False XLOC_023407
TCONS_00046315 lncRNA upstream 949745 21137175 ~ 21139396 (-) False XLOC_023418
TCONS_00046276 mRNA downstream 34351 20064088 ~ 20152965 (-) True XLOC_023399
TCONS_00046269 mRNA downstream 170499 20006711 ~ 20016817 (-) False XLOC_023396
TCONS_00046270 mRNA downstream 170499 20010052 ~ 20016817 (-) False XLOC_023396
TCONS_00046268 mRNA downstream 468076 19708869 ~ 19719240 (-) True XLOC_023394
TCONS_00046265 mRNA downstream 469239 19707609 ~ 19718077 (-) False XLOC_023394
TCONS_00046278 mRNA upstream 1484 20188914 ~ 20192996 (-) True XLOC_023402
TCONS_00046279 mRNA upstream 6592 20194022 ~ 20208474 (-) True XLOC_023403
TCONS_00046280 mRNA upstream 26988 20214418 ~ 20321012 (-) False XLOC_023404
TCONS_00046281 mRNA upstream 41810 20229240 ~ 20320480 (-) True XLOC_023404
TCONS_00046282 mRNA upstream 145549 20332979 ~ 20369604 (-) False XLOC_023405
TCONS_00046272 other downstream 133059 20032331 ~ 20054257 (-) False XLOC_023397
TCONS_00046273 other downstream 148166 20032340 ~ 20039150 (-) True XLOC_023397
TCONS_00046264 other downstream 898548 19288654 ~ 19288768 (-) True XLOC_023393
TCONS_00046263 other downstream 1267759 18910017 ~ 18919557 (-) True XLOC_023392
TCONS_00046256 other downstream 1561949 18625252 ~ 18625367 (-) True XLOC_023390
TCONS_00046286 other upstream 262597 20450027 ~ 20531586 (-) False XLOC_023407
TCONS_00046292 other upstream 283524 20470954 ~ 20471090 (-) True XLOC_023407
TCONS_00046297 other upstream 460045 20647475 ~ 20658668 (-) False XLOC_023409
TCONS_00046316 other upstream 951892 21139322 ~ 21144300 (-) True XLOC_023418
TCONS_00046357 other upstream 1775622 21963052 ~ 21963168 (-) True XLOC_023437